Escherichia coli EC1 |
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Putative Escherichia coli EC1 RM systems
Ref: Mowlaboccus,S. et al. unpublished
REBASE ref # 30879
| Sequence length: | GenBank #: | |
| Chromosome: | 5,078,198 bp | CP058574 |
| plasmid pEC1-1: | 122,379 bp | CP058575 |
| plasmid pEC1-2: | 77,194 bp | CP058576 |
REBASE acronym: EcoEC1M
Org_num: 41810
All begin HYH05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20800 | adenine/cytosine-specific restriction | |||
| 20805 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoEC1MORF20810P |
| 20810 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoEC1MORF20810P |
| 20815 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoEC1MORF20810P |
| 20820 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1875 | cell division protein DamX | |||
| 1880 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoEC1MDamP |
| 1885 | ribulose-phosphate 3-epimerase | |||
| 2405 | DUF2556 family protein | |||
| 2410 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoEC1MORF2410P |
| 2415 | DNA-binding transcriptional regulator Fis | |||
| 9650 | phosphohydrolase | |||
| 9655 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoEC1MDcmP |
| 9660 | V | V.Fnu048DcmP (100% identity) | V.EcoEC1MDcmP | |
| 9665 | drug/metabolite exporter YedA | |||
| 13300 | DUF1737 domain-containing protein | |||
| 13320 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoEC1MORF13320P |
| 13325 | TrmB family transcriptional regulator | |||
| 14230 | NinE family protein | |||
| 14235 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoEC1MORF14235P |
| 14240 | recombination protein NinB | |||
| plasmid pEC1-1 | ||||
| 24835 | 102 aa hypothetical protein | |||
| 24840 | M | M.Ecowhn14ORF35P (100% identity) | M.EcoEC1MORF24840P | |
| 24845 | 73 aa hypothetical protein | |||
| plasmid pEC1-2 | ||||
| 25695 | 97 aa hypothetical protein | |||
| 25700 | M | M.Xca80ORFEP (100% identity) | M.EcoEC1MORF25700P | |
| 25705 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20795 | GTPase | |||
| 20800 | R | Ssp28760MrrP (100% identity) | EcoEC1MMrrP | |
| 20805 | type I restriction-modification system | |||
| 20820 | endoribonuclease SymE | |||
| 20825 | R | SenHNK130McrBP (100% identity) | EcoEC1MMcrBP | |
| 20830 | R | SenHNK130McrCP (100% identity) | EcoEC1MMcrCP | |