Escherichia coli EcPF16 |
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Putative Escherichia coli EcPF16 RM systems
Ref: Sharon,B.M. et al. unpublished
REBASE ref # 30788
Complete sequence: 4,721,932 bp
GenBank #: CP054224
REBASE acronym: EcoPF16
Org_num: 41485
All begin HR074_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19615 | toll/interleukin-1 receptor domain-containing | |||
| 19620 | R | EhoG17ORF4570P (100% identity) | EcoPF16ORF19625P | |
| 19625 | M | M.EhoG17ORF4570P (100% identity) | M.EcoPF16ORF19625P | |
| 19630 | S | S.EhoG17ORF4570P (100% identity) | S.EcoPF16ORF19625P | |
| 19635 | SIR2 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 465 | 8-oxoguanine DNA glycosylase | |||
| 470 | M | M.EcoT654ORF450P (100% identity) | M.EcoPF16ORF470P | |
| 475 | dNTP triphosphohydrolase | |||
| 1875 | cell division protein DamX | |||
| 1880 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPF16DamP |
| 1885 | ribulose-phosphate 3-epimerase | |||
| 2465 | IS1 family transposase | |||
| 2470 | M | M.EcoS1ORF70P (100% identity) | ATGCAT | M.EcoPF16ORF2470P |
| 2475 | DNA-binding transcriptional regulator Fis | |||
| 3960 | 177 aa hypothetical protein | |||
| 3965 | M | M.Ykr60539ORF1485P (100% identity) | M.EcoPF16ORF3965P | |
| 3970 | DUF2441 domain-containing protein | |||
| 4235 | DEAD/DEAH box helicase | |||
| 4240 | RM | EcoFu022ORF17895P (100% identity) | EcoPF16ORF4240P | |
| 9035 | phosphohydrolase | |||
| 9040 | M | M.SspS13DcmP (99% identity) | CCWGG | M.EcoPF16DcmP |
| 9045 | V | V.SsoSE61DcmP (100% identity) | V.EcoPF16DcmP | |
| 9050 | drug/metabolite exporter YedA | |||
| 20820 | DUF262 domain-containing protein | |||
| 20825 | R | EcoSHP24ORF23700P (100% identity) | EcoPF16ORF20830P | |
| 20830 | M | M.EcoST131ORF16015P (100% identity) | M.EcoPF16ORF20830P | |
| 20835 | antitermination protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21750 | 59 aa hypothetical protein | |||
| 21755 | M | M.KspBL05ORF46540P (99% identity) | M.EcoPF16ORF21755P | |
| 21760 | 82 aa hypothetical protein | |||