Escherichia coli AH62 |
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Putative Escherichia coli AH62 RM systems
Ref: Yin,D. unpublished
REBASE ref # 29305
| Sequence length: | GenBank #: | |
| Chromosome: | 4,799,791 bp | CP055259 |
| plasmid pAH62-2: | 84,033 bp | CP055261 |
REBASE acronym: EcoAH62
Org_num: 41466
All begin HU676_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13775 | transcription factor | |||
| 13780 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.EcoAH62ORF13780P |
| 13785 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.EcoAH62ORF13780P |
| 13790 | DUF4433 domain-containing protein | |||
| 13795 | macro domain-containing protein | |||
| 13800 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | EcoAH62ORF13780P |
| 13805 | M48 family metallopeptidase | |||
| 19580 | 322 aa hypothetical protein | |||
| 19585 | R | SspS13ORF3945P (100% identity) | EcoAH62ORF19590P | |
| 19590 | M | M.EcoAH65ORF14220P (100% identity) | M.EcoAH62ORF19590P | |
| 19595 | S | S.EcoAH65ORF14220P (100% identity) | S.EcoAH62ORF19590P | |
| 19600 | endoribonuclease SymE | |||
| 19855 | 60 aa hypothetical protein | |||
| 19860 | M | M.EcoAH65ORF13950P (100% identity) | M.EcoAH62ORF19860P | |
| 19865 | S | S.EcoAH65ORF13950P (100% identity) | S.EcoAH62ORF19860P | |
| 19870 | DUF4268 domain-containing protein | |||
| 19875 | R | EcoAH65ORF13950P (100% identity) | EcoAH62ORF19860P | |
| 19880 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoAH62DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Ecou015ORF2460P (100% identity) | ATGCAT | M.EcoAH62ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 8760 | phosphohydrolase | |||
| 8765 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoAH62DcmP |
| 8770 | V | V.EcosPA11DcmP (100% identity) | V.EcoAH62DcmP | |
| 8775 | drug/metabolite exporter YedA | |||
| 17910 | LexA family transcriptional regulator | |||
| 17915 | M | M.EcoAH65ORF15895P (100% identity) | GATC | M.EcoAH62ORF17915P |
| 17920 | PerC family transcriptional regulator | |||
| 19880 | 165 aa hypothetical protein | |||
| 19885 | R | SflFF64ORF19855P (100% identity) | GAAC | EcoAH62ORF19885P |
| 19890 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pAH62-2 | ||||
| 23455 | 101 aa hypothetical protein | |||
| 23460 | M | M.SflFF3ORF25360P (100% identity) | M.EcoAH62ORF23460P | |
| 23465 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17795 | 300 aa hypothetical protein | |||
| 17800 | R | EcoAH65GmrSDP (100% identity) | EcoAH62GmrSDP | |
| 17805 | recombinase family protein | |||