Escherichia coli SCU-103 |
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Putative Escherichia coli SCU-103 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30384
| Sequence length: | GenBank #: | |
| Chromosome: | 5,172,797 bp | CP054457 |
| plasmid pSCU-103-1: | 138,518 bp | CP054458 |
| plasmid pSCU-103-2: | 83,055 bp | CP054459 |
REBASE acronym: EcoSCU103
Org_num: 40719
All begin HPE39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3015 | 52 aa hypothetical protein | |||
| 3020 | R | EcoS942ORF17760P (100% identity) | RTCANNNNNNCTC | EcoSCU103ORF3030P |
| 3025 | S | S.EcoS942ORF17760P (100% identity) | RTCANNNNNNCTC | S.EcoSCU103ORF3030P |
| 3030 | M | M.EcoS942ORF17760P (100% identity) | RTCANNNNNNCTC | M.EcoSCU103ORF3030P |
| 3035 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 860 | replication endonuclease | |||
| 865 | M | M.SspS13ORF1655P (100% identity) | M.EcoSCU103ORF865P | |
| 870 | 226 aa hypothetical protein | |||
| 3045 | McrC family protein | |||
| 3050 | R | EcoS942ORF17780P (100% identity) | EcoSCU103ORF3050P | |
| 3055 | HNH endonuclease | |||
| 9715 | TrmB family transcriptional regulator | |||
| 9720 | M | M.Eco818062ORFLP (97% identity) | M.EcoSCU103ORF9720P | |
| 9740 | tellurite resistance protein | |||
| 10810 | TrmB family transcriptional regulator | |||
| 10815 | M | M.EcoS942ORF1060P (100% identity) | M.EcoSCU103ORF10815P | |
| 10830 | cell envelope integrity protein TolA | |||
| 15350 | drug/metabolite exporter YedA | |||
| 15355 | V | V.EcoSTEC1080DcmP (94% identity) | V.EcoSCU103DcmP | |
| 15360 | M | M.EcoFT130DcmP (99% identity) | CCWGG | M.EcoSCU103DcmP |
| 15365 | phosphohydrolase | |||
| 16870 | LexA family transcriptional regulator | |||
| 16875 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.EcoSCU103ORF16875P |
| 16880 | PerC family transcriptional regulator | |||
| 23135 | DNA-binding transcriptional regulator Fis | |||
| 23140 | M | M.SenHNK130ORF11595P (95% identity) | ATGCAT | M.EcoSCU103ORF23140P |
| 23145 | DUF2556 family protein | |||
| 23690 | ribulose-phosphate 3-epimerase | |||
| 23695 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSCU103DamP |
| 23700 | cell division protein DamX | |||
| plasmid pSCU-103-1 | ||||
| 26530 | 73 aa hypothetical protein | |||
| 26535 | M | M.Ecowhn14ORF35P (100% identity) | M.EcoSCU103ORF26535P | |
| 26540 | 102 aa hypothetical protein | |||
| plasmid pSCU-103-2 | ||||
| 26865 | 73 aa hypothetical protein | |||
| 26870 | M | M.Eco8189ORFGP (100% identity) | M.EcoSCU103ORF26870P | |
| 26875 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3035 | DUF4942 domain-containing protein | |||
| 3040 | R | SflSTLE4McrBP (100% identity) | EcoSCU103McrBP | |
| 3045 | R | SflSTLE4McrCP (99% identity) | EcoSCU103McrCP | |
| 3050 | HNH endonuclease | |||