Escherichia coli MS6193 |
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Putative Escherichia coli MS6193 RM systems
Ref: Ashcroft,M. et al. unpublished
REBASE ref # 30435
| Sequence length: | GenBank #: | |
| Chromosome: | 4,922,872 bp | CP047405 |
| plasmid pMS6193A-NDM: | 142,890 bp | CP047406 |
| plasmid pMS6193B: | 76,661 bp | CP047407 |
REBASE acronym: Eco6193
Org_num: 40373
All begin MS6193_, MS6193_A, MS6193_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3820 | 400 aa hypothetical protein | |||
| 3821 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.Eco6193ORF3821P |
| 3822 | 371 aa hypothetical protein | |||
| 3823 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S2.Eco6193ORF3821P |
| 3824 | Divergent AAA domain protein | |||
| 3825 | chromosome segregation protein | |||
| 3826 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | Eco6193ORF3821P |
| 3827 | Helix-turn-helix domain protein | |||
| 4748 | toxin-like protein of the SOS response | |||
| 4750 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco6193ORF4751P |
| 4751 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco6193ORF4751P |
| 4752 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco6193ORF4751P |
| 4753 | 322 aa hypothetical protein | |||
| plasmid pMS6193A-NDM | ||||
| 159 | Phd YefM | |||
| 160 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.Eco6193ORF160P |
| 161 | S | S.EcoS497ORF620P (100% identity) | CAAYNNNNNNCTGG | S.Eco6193ORF160P |
| 162 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco6193ORF160P |
| 163 | IS1 protein InsB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 320 | recombination protein F | |||
| 321 | M | M.Ecos195ORF4155P (100% identity) | M.Eco6193ORF321P | |
| 322 | 947 aa hypothetical protein | |||
| 955 | 75 aa hypothetical protein | |||
| 956 | M | M.SflFF34ORF22630P (100% identity) | GATC | M.Eco6193ORF956P |
| 957 | Bacteriophage replication gene A protein (GPA) | |||
| 2140 | membrane transport protein | |||
| 2141 | V | V.EcoTH9F11DcmP (100% identity) | V.Eco6193DcmP | |
| 2142 | M | M.Eco6192DcmP (100% identity) | CCWGG | M.Eco6193DcmP |
| 2143 | phosphohydrolase | |||
| 2632 | 119 aa hypothetical protein | |||
| 2633 | M | M.Eco6192ORF2605P (100% identity) | GATC | M.Eco6193ORF2633P |
| 2634 | NinB protein | |||
| 3594 | Fis DNA-binding transcriptional dual regulator | |||
| 3595 | M | M.EcoTH9F11ORF2180P (100% identity) | ATGCAT | M.Eco6193ORF3595P |
| 3596 | membrane protein | |||
| 3703 | ribulose-5-phosphate 3-epimerase | |||
| 3704 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco6193DamP |
| 3705 | cell division protein DamX | |||
| 4708 | MrcB subunit of 5-methylcytosine restriction | |||
| 4709 | R | SflN101ORF11875P (100% identity) | Eco6193ORF4709P | |
| 4710 | 9-O-acetyl-N-acetylneuraminate | |||
| 4803 | yfdN | |||
| 4804 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco6193ORF4804P |
| 4805 | LexA DNA-binding transcriptional repressor | |||
| 4811 | 67 aa hypothetical protein | |||
| 4812 | M | M.Sso63633ORF22290P (100% identity) | M.Eco6193ORF4812P | |
| 4813 | phage lysis protein | |||
| plasmid pMS6193A-NDM | ||||
| 8 | 308 aa hypothetical protein | |||
| 9 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco6193ORF9P |
| 10 | 73 aa hypothetical protein | |||
| plasmid pMS6193B | ||||
| 10 | Plasmid segregation protein ParM | |||
| 11 | M | M.SenST46ORF25580P (100% identity) | M.Eco6193ORF11P | |
| 12 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4706 | 128 aa hypothetical protein | |||
| 4707 | R | SflN101McrCP (100% identity) | Eco6193McrCP | |
| 4708 | R | SflN101McrBP (100% identity) | Eco6193McrBP | |
| 4709 | 290 aa hypothetical protein | |||