Escherichia coli SCU-171 |
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Putative Escherichia coli SCU-171 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30384
Complete sequence: 5,200,581 bp
GenBank #: CP054363
REBASE acronym: EcoSCU171
Org_num: 40279
All begin HPE49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17925 | endoribonuclease SymE | |||
| 17930 | S | S.EcoC9705I (100% identity) | RTCANNNNNNNNRTRTC | S.EcoSCU171ORF17935P |
| 17935 | M | M.Sdy49345I (97% identity) | RTCANNNNNNNNRTRTC | M.EcoSCU171ORF17935P |
| 17940 | R | EcoC9705IP (100% identity) | RTCANNNNNNNNRTRTC | EcoSCU171ORF17935P |
| 17945 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1600 | DUF1737 domain-containing protein | |||
| 1620 | M | M.Eco3038ORF23195P (99% identity) | M.EcoSCU171ORF25425P | |
| 1625 | TrmB family transcriptional regulator | |||
| 3640 | drug/metabolite exporter YedA | |||
| 3645 | V | V.SsoSE61DcmP (100% identity) | V.EcoSCU171DcmP | |
| 3650 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoSCU171DcmP |
| 3655 | phosphohydrolase | |||
| 8125 | 113 aa hypothetical protein | |||
| 8130 | R | StyD4I (56% identity) | EcoSCU171ORF8135P | |
| 8135 | M | M.StyD4I (75% identity) | M.EcoSCU171ORF8135P | |
| 8140 | PerC family transcriptional regulator | |||
| 11340 | DNA-binding transcriptional regulator Fis | |||
| 11345 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoSCU171ORF11345P |
| 11350 | DUF2556 family protein | |||
| 11940 | ribulose-phosphate 3-epimerase | |||
| 11945 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU171DamP |
| 11950 | cell division protein DamX | |||
| 16610 | IS66 family insertion sequence element accessory | |||
| 16615 | R | Eco3033ORFNP (99% identity) | EcoSCU171ORF16620P | |
| 16620 | M | M.Eco3033ORFNP (100% identity) | M.EcoSCU171ORF16620P | |
| 16625 | CcdB family protein | |||
| 17605 | BREX system P-loop protein BrxC | |||
| 17610 | RM | EcoC9705ORF4295P (100% identity) | EcoSCU171ORF17610P | |
| 17615 | AAA family ATPase | |||
| 17735 | 678 aa hypothetical protein | |||
| 17740 | R | SflFF17ORF19275P (100% identity) | EcoSCU171ORF17740P | |
| 17745 | HNH endonuclease | |||
| 23760 | recombination protein NinB | |||
| 23765 | M | M.SflFF36ORF6645P (100% identity) | GATC | M.EcoSCU171ORF23765P |
| 23770 | NinE family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16730 | DUF1281 domain-containing protein | |||
| 16735 | R | Eco3033ORFJP (99% identity) | EcoSCU171ORF16740P | |
| 16740 | M | M.Eco3033ORFJP (99% identity) | M.EcoSCU171ORF16740P | |
| 16745 | 68 aa hypothetical protein | |||