Escherichia coli ampC_0069 |
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Putative Escherichia coli ampC_0069 RM systems
Ref: Coolen,J.P.M. et al. unpublished
REBASE ref # 30385
Complete sequence: 5,056,572 bp
GenBank #: CP046396
REBASE acronym: Eco0069
Org_num: 40289
All begin GNX12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9845 | IS3 family transposase | |||
| 9850 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco0069ORF9850P |
| 9855 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco0069ORF9850P |
| 9860 | UPF0149 family protein | |||
| 9865 | cold-shock protein | |||
| 9870 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco0069ORF9850P |
| 9875 | DUF45 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0069DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 domain-containing protein | |||
| 2315 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco0069ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 9570 | phosphohydrolase | |||
| 9575 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco0069DcmP |
| 9580 | V | V.Ecos142DcmP (100% identity) | V.Eco0069DcmP | |
| 9585 | drug/metabolite exporter YedA | |||
| 14680 | TraR/DksA family transcriptional regulator | |||
| 14685 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco0069ORF14685P |
| 14690 | replication endonuclease | |||
| 17080 | TrmB family transcriptional regulator | |||
| 17085 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco0069ORF17085P |
| 17100 | DUF3927 domain-containing protein | |||
| 18660 | phage lysis protein EssD | |||
| 18665 | M | M.Ecos142ORF20090P (100% identity) | M.Eco0069ORF18665P | |
| 18670 | 67 aa hypothetical protein | |||
| 18700 | LexA family transcriptional regulator | |||
| 18705 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco0069ORF18705P |
| 18710 | PerC family transcriptional regulator | |||
| 22085 | LexA family transcriptional regulator | |||
| 22090 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco0069ORF22090P |
| 22095 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20570 | 100 aa hypothetical protein | |||
| 20575 | R | SflN116ORF19490P (77% identity) | Eco0069ORF20575P | |
| 20580 | IS1 family transposase | |||