Escherichia coli TUM18530 |
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Putative Escherichia coli TUM18530 RM systems
Ref: Ito,Y. et al. unpublished
REBASE ref # 30310
| Sequence length: | GenBank #: | |
| Chromosome: | 4,894,739 bp | AP023190 |
| plasmid pMTY18530-1_lncHI2: | 272,842 bp | AP023191 |
| plasmid pMTY18530-3_incFll: | 112,963 bp | AP023193 |
REBASE acronym: Eco18530
Org_num: 40085
All begin TUM18530_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27600 | 290 aa hypothetical protein | |||
| 27610 | M | M.Eco18780ORF27570P (100% identity) | CACNNNNNNTCC | M.Eco18530ORF27610P |
| 27620 | S | S.EcoTHO010ORF28970P (100% identity) | CACNNNNNNTCC | S.Eco18530ORF27610P |
| 27630 | R | EcoW25IIP (100% identity) | CACNNNNNNTCC | Eco18530ORF27610P |
| 27640 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3650 | cell division protein DamX | |||
| 3660 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco18530DamP |
| 3670 | ribulose-phosphate 3-epimerase | |||
| 4680 | acrEF/envCD operon transcriptional regulator | |||
| 4690 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco18530ORF4690P |
| 4700 | DNA-binding protein Fis | |||
| 8600 | transcriptional regulator | |||
| 8610 | R | EcoTHO010ORF9060P (100% identity) | Eco18530ORF8610P | |
| 8620 | 536 aa hypothetical protein | |||
| 10760 | outer membrane autotransporter barrel | |||
| 10770 | R | Sens24184ORF5380P (100% identity) | C | Eco18530ORF10770P |
| 10780 | 187 aa hypothetical protein | |||
| 17170 | 107 aa hypothetical protein | |||
| 17180 | M | M.EcoR5DcmP (100% identity) | CCWGG | M.Eco18530DcmP |
| 17190 | V | V.EcoLR291DcmP (100% identity) | V.Eco18530DcmP | |
| 17200 | multidrug transporter | |||
| 34600 | LexA family transcriptional regulator | |||
| 34610 | M | M.EcoH22ORF14600P (100% identity) | GATC | M.Eco18530ORF34610P |
| 34620 | 162 aa hypothetical protein | |||
| 38720 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 38730 | R | EcoW619ORFAP (96% identity) | Eco18530ORF38730P | |
| 38740 | 100 aa hypothetical protein | |||
| plasmid pMTY18530-1_lncHI2 | ||||
| 45830 | nuclease | |||
| ??? | M | M.YpsF1ORFCP (100% identity) | M.Eco18530ORF45850P | |
| 45860 | 55 aa hypothetical protein | |||
| 47100 | 108 aa hypothetical protein | |||
| 47110 | M | M.YpsF1ORFBP (100% identity) | M.Eco18530ORF47110P | |
| 47120 | 202 aa hypothetical protein | |||
| 47450 | DNA-binding protein | |||
| 47460 | M | M.YpsF1ORFDP (84% identity) | M.Eco18530ORF47460P | |
| 47470 | 85 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38740 | 100 aa hypothetical protein | |||
| 38750 | R | Ecos19ORF20250P (100% identity) | Eco18530ORF38760P | |
| 38760 | M | M.EcoXH990ORF24545P (100% identity) | M.Eco18530ORF38760P | |
| 38770 | DNA helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMTY18530-3_incFll | ||||
| 49850 | 76 aa hypothetical protein | |||
| 49860 | M | M.Sso524ORF460P (100% identity) | M.Eco18530ORF49860P | |
| 49870 | 269 aa hypothetical protein | |||