Escherichia coli NMBU_ W06E18 |
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Putative Escherichia coli NMBU_ W06E18 RM systems
Ref: Finton,M.D. et al. unpublished
REBASE ref # 30302
| Sequence length: | GenBank #: | |
| Chromosome: | 5,248,629 bp | CP047609 |
| plasmid pNMBU_W06E18_Str1_1: | 51,704 bp | CP047610 |
| plasmid pNMBU_W06E18_Str1_4: | 64,483 bp | CP047613 |
REBASE acronym: EcoW06E18
Org_num: 40004
All begin GU332_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24280 | endoribonuclease SymE | |||
| 24285 | S | S.EcoW10C18ORF4200P (100% identity) | CCANNNNNNNCTTC | S.EcoW06E18ORF24290P |
| 24290 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoW06E18ORF24290P |
| ??? | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoW06E18ORF24290P |
| 24300 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10050 | drug/metabolite exporter YedA | |||
| 10055 | V | V.SflSTLE3DcmP (100% identity) | V.EcoW06E18DcmP | |
| 10060 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoW06E18DcmP |
| 10065 | HD domain-containing protein | |||
| 11150 | 330 aa hypothetical protein | |||
| 11155 | M | M.Sbo812ORFEP (100% identity) | M.EcoW06E18ORF11155P | |
| 11160 | replication endonuclease | |||
| 14085 | NinE family protein | |||
| 14090 | M | M.EcoWN4ORF7335P (100% identity) | GATC | M.EcoW06E18ORF14090P |
| 14095 | recombination protein NinB | |||
| 14760 | DNA-binding transcriptional regulator Fis | |||
| 14765 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoW06E18ORF14765P |
| 14770 | DUF2556 domain-containing protein | |||
| 17890 | DNA-binding transcriptional regulator Fis | |||
| 17895 | M | M.Ecod6c8ORFAP (100% identity) | ATGCAT | M.EcoW06E18ORF17895P |
| 17900 | DUF2556 domain-containing protein | |||
| 18420 | ribulose-phosphate 3-epimerase | |||
| 18425 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW06E18DamP |
| 18430 | cell division protein DamX | |||
| plasmid pNMBU_W06E18_Str1_1 | ||||
| 25320 | 102 aa hypothetical protein | |||
| 25325 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoW06E18ORF25325P |
| 25330 | 73 aa hypothetical protein | |||
| plasmid pNMBU_W06E18_Str1_4 | ||||
| 26345 | 102 aa hypothetical protein | |||
| 26350 | M | M.SenST46ORF25580P (100% identity) | M.EcoW06E18ORF26350P | |
| 26355 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24295 | type I restriction-modification system | |||
| 24300 | R | EcosS1MrrP (100% identity) | EcoW06E18MrrP | |
| 24305 | GTPase | |||