Escherichia coli NMBU-W10C18 |
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Putative Escherichia coli NMBU-W10C18 RM systems
Ref: Finton,M.D. et al. unpublished
REBASE ref # 30302
| Sequence length: | GenBank #: | |
| Chromosome: | 5,133,330 bp | CP044403 |
| plasmid pNMBU-W10C18_01: | 114,329 bp | CP044404 |
| plasmid pNMBU-W10C18_02: | 49,118 bp | CP044402 |
REBASE acronym: EcoW10C18
Org_num: 40002
All begin F7O57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4190 | endoribonuclease SymE | |||
| 4195 | S | S.EcoW06E18ORF24290P (100% identity) | CCANNNNNNNCTTC | S.EcoW10C18ORF4200P |
| 4200 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoW10C18ORF4200P |
| ??? | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoW10C18ORF4200P |
| 4210 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15425 | drug/metabolite exporter YedA | |||
| 15430 | V | V.SflSTLE3DcmP (100% identity) | V.EcoW10C18DcmP | |
| 15435 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoW10C18DcmP |
| 15440 | HD domain-containing protein | |||
| 16620 | 330 aa hypothetical protein | |||
| 16625 | M | M.Sbo812ORFEP (100% identity) | M.EcoW10C18ORF16625P | |
| 16630 | replication endonuclease | |||
| 18105 | NinE family protein | |||
| 18110 | M | M.EcoWN4ORF7335P (100% identity) | GATC | M.EcoW10C18ORF18110P |
| 18115 | recombination protein NinB | |||
| 22895 | DNA-binding transcriptional regulator Fis | |||
| 22900 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoW10C18ORF22900P |
| 22905 | DUF2556 domain-containing protein | |||
| 23430 | ribulose-phosphate 3-epimerase | |||
| 23435 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW10C18DamP |
| 23440 | cell division protein DamX | |||
| plasmid pNMBU-W10C18_01 | ||||
| 26200 | 73 aa hypothetical protein | |||
| 26205 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoW10C18ORF120P |
| 26210 | 102 aa hypothetical protein | |||
| plasmid pNMBU-W10C18_02 | ||||
| 115 | 102 aa hypothetical protein | |||
| 120 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoW10C18ORF120P |
| 125 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4205 | type I restriction-modification system | |||
| 4210 | R | EcosS1MrrP (100% identity) | EcoW10C18MrrP | |
| 4215 | GTPase | |||