Escherichia coli O10:H32 NMBU-W12E19 |
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Putative Escherichia coli O10:H32 NMBU-W12E19 RM systems
Ref: Finton,M.D. et al. unpublished
REBASE ref # 30302
| Sequence length: | GenBank #: | |
| Chromosome: | 5,165,075 bp | CP042892 |
| plasmid pNMBU-W12E19_02: | 88,772 bp | CP042886 |
| plasmid pNMBU-W12E19_03: | 68,601 bp | CP042887 |
REBASE acronym: EcoW12E19
Org_num: 40000
All begin FVP48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13175 | restriction endonuclease | |||
| 13180 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoW12E19ORF13180P |
| 13185 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoW12E19ORF13180P |
| 13190 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoW12E19ORF13180P |
| 13195 | IS5 family transposase | |||
| 23670 | 402 aa hypothetical protein | |||
| 23675 | R | EcoMIN9ORF6715P (100% identity) | EcoW12E19ORF23680P | |
| 23680 | M | M.EcoD216ORF6465P (100% identity) | M.EcoW12E19ORF23680P | |
| 23685 | S | S.EcoMIN9ORF6715P (100% identity) | S.EcoW12E19ORF23680P | |
| 23690 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4755 | 73 aa hypothetical protein | |||
| 4775 | M | M.Eal15512ORF10405P (100% identity) | A | M.EcoW12E19ORF4775P |
| 4780 | TrmB family transcriptional regulator | |||
| 5765 | 61 aa hypothetical protein | |||
| 5785 | M | M.SflFF12ORF4115P (99% identity) | M.EcoW12E19ORF5785P | |
| 5790 | TrmB family transcriptional regulator | |||
| 8375 | replication endonuclease | |||
| 8380 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoW12E19ORF8380P |
| 8385 | TraR/DksA family transcriptional regulator | |||
| 11440 | NinE family protein | |||
| 11445 | M | M.Eph2012ORF32P (100% identity) | GATC | M.EcoW12E19ORF11445P |
| 11450 | recombination protein NinB | |||
| 18090 | cell division protein DamX | |||
| 18095 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW12E19DamP |
| 18100 | ribulose-phosphate 3-epimerase | |||
| 18725 | DUF2556 domain-containing protein | |||
| 18730 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoW12E19ORF18730P |
| 18735 | DNA-binding transcriptional regulator Fis | |||
| 25940 | phosphohydrolase | |||
| 25945 | M | M.SspS13DcmP (99% identity) | CCWGG | M.EcoW12E19DcmP |
| 25950 | V | V.SsoSE61DcmP (100% identity) | V.EcoW12E19DcmP | |
| 25955 | drug/metabolite exporter YedA | |||
| plasmid pNMBU-W12E19_02 | ||||
| 1210 | 102 aa hypothetical protein | |||
| 1215 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.EcoW12E19ORF1215P |
| 1220 | 73 aa hypothetical protein | |||
| plasmid pNMBU-W12E19_03 | ||||
| 1790 | 59 aa hypothetical protein | |||
| 1795 | M | M.Xca80ORFEP (100% identity) | M.EcoW12E19ORF1795P | |
| 1800 | 73 aa hypothetical protein | |||