Escherichia coli CP66-6_Sichuan |
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Putative Escherichia coli CP66-6_Sichuan RM systems
Ref: Li,R. et al. unpublished
REBASE ref # 30299
| Sequence length: | GenBank #: | |
| Chromosome: | 4,815,440 bp | CP053723 |
| plasmid pCP66-6-IncFII: | 74,817 bp | CP053725 |
REBASE acronym: EcoCP666
Org_num: 39996
All begin HP433_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3415 | IS3 family transposase | |||
| 3420 | M | M.SenSI167ORF3215P (100% identity) | M.EcoCP666ORF3420P | |
| 3425 | S | S.SenSI167ORF3215P (100% identity) | S.EcoCP666ORF3420P | |
| 3430 | DUF4268 domain-containing protein | |||
| 3435 | R | SenSI167ORF3215P (100% identity) | EcoCP666ORF3420P | |
| 3440 | ATP-binding protein | |||
| 10015 | 410 aa hypothetical protein | |||
| 10020 | M | M.EcoYPE12ORF11395P (100% identity) | M.EcoCP666ORF10020P | |
| 10025 | S | S.EcoYPE12ORF11395P (100% identity) | S.EcoCP666ORF10020P | |
| 10030 | YecA family protein | |||
| 10035 | cold shock domain-containing protein | |||
| 10040 | R | Eco1426ORF9070P (100% identity) | EcoCP666ORF10020P | |
| 10045 | M48 family metallopeptidase | |||
| 19955 | 322 aa hypothetical protein | |||
| 19960 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoCP666ORF19965P |
| 19965 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoCP666ORF19965P |
| 19970 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoCP666ORF19965P |
| 19975 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCP666DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoCP666ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 9685 | phosphohydrolase | |||
| 9690 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.EcoCP666DcmP |
| 9695 | V | V.EcosEC71DcmP (100% identity) | V.EcoCP666DcmP | |
| 9700 | drug/metabolite exporter YedA | |||
| 20165 | HNH endonuclease | |||
| 20170 | R | SflN101ORF11875P (100% identity) | EcoCP666ORF20170P | |
| 20175 | AAA domain-containing protein | |||
| plasmid pCP66-6-IncFII | ||||
| 23910 | 102 aa hypothetical protein | |||
| 23915 | M | M.SenST46ORF25580P (100% identity) | M.EcoCP666ORF23915P | |
| 23920 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCP66-6-IncFII | ||||
| 23805 | 67 aa hypothetical protein | |||
| 23810 | M | M.SspS13ORF650P (100% identity) | M.EcoCP666ORF23810P | |
| 23815 | R | SspS13ORF650P (100% identity) | EcoCP666ORF23810P | |
| 23820 | tRNA modification GTPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20170 | HNH endonuclease | |||
| 20175 | R | SflN101McrBP (100% identity) | EcoCP666McrBP | |
| 20180 | R | SflN101McrCP (100% identity) | EcoCP666McrCP | |
| 20185 | integrase arm-type DNA-binding domain-containing | |||