Escherichia coli O157:H7 17B6-2 |
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Putative Escherichia coli O157:H7 17B6-2 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,542,130 bp | CP038414 |
| plasmid p17B6-1: | 92,490 bp | CP038415 |
REBASE acronym: Eco17B62
Org_num: 40015
All begin E4U86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19360 | 64 aa hypothetical protein | |||
| 19365 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco17B62ORF19365P |
| 19370 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco17B62ORF19365P |
| 19375 | DUF4433 domain-containing protein | |||
| 19380 | Appr-1-p processing protein | |||
| 19385 | R | EcoRC1ORF26055P (100% identity) | CCAYNNNNNGTTY | Eco17B62ORF19365P |
| 19390 | M48 family peptidase | |||
| 24950 | DUF262 domain-containing protein | |||
| 24955 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco17B62ORF24960P |
| 24960 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco17B62ORF24960P |
| 24965 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco17B62ORF24960P |
| 24970 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2345 | cell division protein DamX | |||
| 2350 | M | M.Eco2002DDamP (100% identity) | GATC | M.Eco17B62DamP |
| 2355 | ribulose-phosphate 3-epimerase | |||
| 2885 | DUF2556 domain-containing protein | |||
| 2890 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco17B62ORF2890P |
| 2895 | DNA-binding transcriptional regulator Fis | |||
| 9880 | recombination protein NinB | |||
| 9885 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco17B62ORF9885P |
| 9890 | NinE family protein | |||
| 10785 | phosphohydrolase | |||
| 10790 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco17B62DcmP |
| 10795 | V | V.EcosPA8DcmP (100% identity) | V.Eco17B62DcmP | |
| 10800 | drug/metabolite exporter YedA | |||
| 15610 | 61 aa hypothetical protein | |||
| 15625 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco17B62ORF15625P | |
| 15630 | TrmB family transcriptional regulator | |||
| 23220 | LexA family transcriptional regulator | |||
| 23225 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco17B62ORF23225P |
| 23230 | PerC family transcriptional regulator | |||
| 25190 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco17B62ORF25190P |
| 25195 | DEAD/DEAH box helicase | |||
| 25225 | N-acetylneuraminate epimerase | |||
| 25230 | R | Ecos1613ORF26795P (100% identity) | Eco17B62ORF25230P | |
| 25235 | transposase | |||
| plasmid p17B6-1 | ||||
| 28390 | 101 aa hypothetical protein | |||
| 28395 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco17B62ORF28395P | |
| 28400 | 73 aa hypothetical protein | |||