Escherichia coli O157:H7 DEC4E |
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Putative Escherichia coli O157:H7 DEC4E RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,362,528 bp | CP038398 |
| plasmid pDEC4E-1: | 92,513 bp | CP038401 |
REBASE acronym: EcoDEC4E
Org_num: 9038
All begin E3154_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23720 | DUF262 domain-containing protein | |||
| 23725 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoDEC4EORF5337P |
| 23730 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDEC4EORF5337P |
| 23735 | S | S.Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | S.EcoDEC4EORF5337P |
| 23740 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC4EDamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC4EORF4218P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 10515 | phosphohydrolase | |||
| 10520 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC4EDcmP |
| 10525 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC4EDcmP | |
| 10530 | drug/metabolite exporter YedA | |||
| 14815 | 61 aa hypothetical protein | |||
| 14830 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoDEC4EORF1810P | |
| 14835 | TrmB family transcriptional regulator | |||
| 23965 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDEC4EORF5287P |
| 23970 | DEAD/DEAH box helicase | |||
| 24000 | N-acetylneuraminate epimerase | |||
| 24005 | R | Ecos1613ORF26795P (100% identity) | EcoDEC4EORF24005P | |
| 24010 | transposase | |||
| plasmid pDEC4E-1 | ||||
| 27250 | 101 aa hypothetical protein | |||
| 27255 | M | M.EcosPA8ORF27775P (99% identity) | M.EcoDEC4EORF1343P | |
| 27260 | 73 aa hypothetical protein | |||