Escherichia coli O157:H7 DEC5B |
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Putative Escherichia coli O157:H7 DEC5B RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,294,183 bp | CP038389 |
| plasmid pDEC5B-5: | 99,707 bp | CP038393 |
REBASE acronym: EcoDEC5B
Org_num: 9041
All begin E3156_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23195 | DUF262 domain-containing protein | |||
| 23200 | R | EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | EcoDEC5BORF57P |
| 23205 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDEC5BORF57P |
| 23210 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoDEC5BORF57P |
| 23215 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2425 | cell division protein DamX | |||
| 2430 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC5BDamP |
| 2435 | ribulose-phosphate 3-epimerase | |||
| 2950 | DUF2556 domain-containing protein | |||
| 2955 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC5BORF4351P |
| 2960 | DNA-binding transcriptional regulator Fis | |||
| 10215 | TrmB family transcriptional regulator | |||
| 10220 | M | M.EcoD1ORF24995P (100% identity) | A | M.EcoDEC5BORF2703P |
| 10240 | anti-adapter protein IraM | |||
| 10850 | phosphohydrolase | |||
| 10855 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC5BDcmP |
| 10860 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC5BDcmP | |
| 10865 | drug/metabolite exporter YedA | |||
| 19605 | DUF1317 family protein | |||
| 19610 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoDEC5BORF802P |
| 19615 | cell division protein ZapA | |||
| 21385 | NinE family protein | |||
| 21390 | M | M.EcoTB182AORF20675P (100% identity) | GATC | M.EcoDEC5BORF432P |
| 21395 | recombination protein NinB | |||
| 23430 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDEC5BORF8P |
| 23435 | DEAD/DEAH box helicase | |||
| 23465 | N-acetylneuraminate epimerase | |||
| 23470 | R | EcoS946ORF14580P (100% identity) | EcoDEC5BORF23470P | |
| 23475 | transposase | |||
| plasmid pDEC5B-5 | ||||
| 27365 | 101 aa hypothetical protein | |||
| 27370 | M | M.Eco335ORFHP (100% identity) | M.EcoDEC5BORF3443P | |
| 27375 | 73 aa hypothetical protein | |||