Escherichia coli O157:H7 F6667 |
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Putative Escherichia coli O157:H7 F6667 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,516,005 bp | CP038366 |
| plasmid pF6667-1: | 93,665 bp | CP038368 |
REBASE acronym: EcoF6667
Org_num: 40028
All begin E4U72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24880 | DUF262 domain-containing protein | |||
| 24885 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF6667ORF24890P |
| 24890 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF6667ORF24890P |
| 24895 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF6667ORF24890P |
| 24900 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2445 | cell division protein DamX | |||
| 2450 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF6667DamP |
| 2455 | ribulose-phosphate 3-epimerase | |||
| 2970 | DUF2556 domain-containing protein | |||
| 2975 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF6667ORF2975P |
| 2980 | DNA-binding transcriptional regulator Fis | |||
| 7720 | DUF1382 family protein | |||
| 7725 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.EcoF6667ORF7725P |
| 7730 | regulator | |||
| 7815 | 261 aa hypothetical protein | |||
| 7820 | R | Sso1099IP (100% identity) | CTGCAG | EcoF6667ORF7825P |
| 7825 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcoF6667ORF7825P |
| 7830 | LexA family transcriptional regulator | |||
| 10580 | recombination protein NinB | |||
| 10585 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoF6667ORF10585P |
| 10590 | NinE family protein | |||
| 11465 | phosphohydrolase | |||
| 11470 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF6667DcmP |
| 11475 | V | V.EcosPA8DcmP (100% identity) | V.EcoF6667DcmP | |
| 11480 | drug/metabolite exporter YedA | |||
| 15845 | 61 aa hypothetical protein | |||
| 15860 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF6667ORF15860P | |
| 15865 | TrmB family transcriptional regulator | |||
| 25125 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoF6667ORF25125P |
| 25130 | DEAD/DEAH box helicase | |||
| 25160 | N-acetylneuraminate epimerase | |||
| 25165 | R | Ecos1613ORF26795P (100% identity) | EcoF6667ORF25165P | |
| 25170 | transposase | |||
| plasmid pF6667-1 | ||||
| 28585 | 101 aa hypothetical protein | |||
| 28590 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF6667ORF28590P | |
| 28595 | 73 aa hypothetical protein | |||