Escherichia coli O157:H7 F8092B |
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Putative Escherichia coli O157:H7 F8092B RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,520,652 bp | CP038355 |
| plasmid pF8092B-1: | 98,062 bp | CP038356 |
REBASE acronym: Eco8092B
Org_num: 40032
All begin E4U83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24990 | DUF262 domain-containing protein | |||
| 24995 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco8092BORF25000P |
| 25000 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco8092BORF25000P |
| 25005 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco8092BORF25000P |
| 25010 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | cell division protein DamX | |||
| 2345 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco8092BDamP |
| 2350 | ribulose-phosphate 3-epimerase | |||
| 2865 | DUF2556 domain-containing protein | |||
| 2870 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco8092BORF2870P |
| 2875 | DNA-binding transcriptional regulator Fis | |||
| 9995 | recombination protein NinB | |||
| 10000 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco8092BORF10000P |
| 10005 | NinE family protein | |||
| 10910 | phosphohydrolase | |||
| 10915 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco8092BDcmP |
| 10920 | V | V.EcosPA8DcmP (100% identity) | V.Eco8092BDcmP | |
| 10925 | drug/metabolite exporter YedA | |||
| 15245 | DUF1737 domain-containing protein | |||
| 15250 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco8092BORF15250P | |
| 15255 | TrmB family transcriptional regulator | |||
| 15635 | 61 aa hypothetical protein | |||
| 15650 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco8092BORF15650P | |
| 15655 | TrmB family transcriptional regulator | |||
| 23290 | LexA family transcriptional regulator | |||
| 23295 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco8092BORF23295P |
| 23300 | PerC family transcriptional regulator | |||
| 25235 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco8092BORF25235P |
| 25240 | DEAD/DEAH box helicase | |||
| 25295 | N-acetylneuraminate epimerase | |||
| 25300 | R | Ecos1613ORF26795P (100% identity) | Eco8092BORF25300P | |
| 25305 | transposase | |||
| 25380 | 87 aa hypothetical protein | |||
| 25385 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco8092BORF25385P |
| 25390 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco8092BORF25385P |
| 25395 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco8092BORF25385P |
| 25400 | DUF4102 domain-containing protein | |||
| plasmid pF8092B-1 | ||||
| 28520 | 101 aa hypothetical protein | |||
| 28525 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco8092BORF28525P | |
| 28530 | 73 aa hypothetical protein | |||