Escherichia coli O157:H7 F8797 |
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Putative Escherichia coli O157:H7 F8797 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,478,773 bp | CP038353 |
| plasmid pF8797-1: | 91,510 bp | CP038354 |
REBASE acronym: EcoF8797
Org_num: 40034
All begin E4U81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24755 | DUF262 domain-containing protein | |||
| 24760 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF8797ORF24765P |
| 24765 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF8797ORF24765P |
| 24770 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF8797ORF24765P |
| 24775 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF8797DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2865 | DUF2556 domain-containing protein | |||
| 2870 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF8797ORF2870P |
| 2875 | DNA-binding transcriptional regulator Fis | |||
| 7595 | DUF1382 family protein | |||
| 7600 | M | M.EspP079ORF2847P (100% identity) | GATC | M.EcoF8797ORF7600P |
| 7605 | 76 aa hypothetical protein | |||
| 7785 | endonuclease | |||
| 7790 | M | M.EcoTWORF3263P (100% identity) | GATC | M.EcoF8797ORF7790P |
| 7795 | NinE family protein | |||
| 10565 | recombination protein NinB | |||
| 10570 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoF8797ORF10570P |
| 10575 | NinE family protein | |||
| 11455 | phosphohydrolase | |||
| 11460 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF8797DcmP |
| 11465 | V | V.EcosPA8DcmP (100% identity) | V.EcoF8797DcmP | |
| 11470 | drug/metabolite exporter YedA | |||
| 15840 | 61 aa hypothetical protein | |||
| 15855 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF8797ORF15855P | |
| 15860 | TrmB family transcriptional regulator | |||
| 25000 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoF8797ORF25000P |
| 25005 | DEAD/DEAH box helicase | |||
| 25035 | N-acetylneuraminate epimerase | |||
| 25040 | R | EcosPA8ORF17350P (100% identity) | EcoF8797ORF25040P | |
| 25045 | transposase | |||
| plasmid pF8797-1 | ||||
| 28185 | 101 aa hypothetical protein | |||
| 28190 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF8797ORF28190P | |
| 28195 | 73 aa hypothetical protein | |||