Escherichia coli O157:H7 NE1127 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 NE1127 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,513,087 bp | CP038321 |
| plasmid pNE1127-1: | 92,701 bp | CP038323 |
| plasmid pNE1127-2: | 145,329 bp | CP038322 |
REBASE acronym: EcoNE1127
Org_num: 40043
All begin E3168_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19435 | 64 aa hypothetical protein | |||
| 19440 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoNE1127ORF19440P |
| 19445 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoNE1127ORF19440P |
| 19450 | DUF4433 domain-containing protein | |||
| 19455 | Appr-1-p processing protein | |||
| 19460 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | EcoNE1127ORF19440P |
| 19465 | M48 family peptidase | |||
| 24830 | DUF262 domain-containing protein | |||
| 24835 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoNE1127ORF24840P |
| 24840 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoNE1127ORF24840P |
| 24845 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoNE1127ORF24840P |
| 24850 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoNE1127DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.Eco11691ORF2865P (100% identity) | ATGCAT | M.EcoNE1127ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 8855 | recombination protein NinB | |||
| 8860 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoNE1127ORF8860P |
| 8865 | NinE family protein | |||
| 10340 | phosphohydrolase | |||
| 10345 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoNE1127DcmP |
| 10350 | V | V.EcosPA8DcmP (100% identity) | V.EcoNE1127DcmP | |
| 10355 | drug/metabolite exporter YedA | |||
| 14185 | DUF1367 family protein | |||
| 14190 | R | Ecos15739ORF2910P (100% identity) | EcoNE1127ORF14200P | |
| 14195 | 329 aa hypothetical protein | |||
| 14200 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoNE1127ORF14200P | |
| 14205 | 81 aa hypothetical protein | |||
| 15105 | 61 aa hypothetical protein | |||
| 15120 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoNE1127ORF15120P | |
| 15125 | TrmB family transcriptional regulator | |||
| 18160 | NinE family protein | |||
| 18165 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoNE1127ORF18165P |
| 18170 | recombination protein NinB | |||
| 25070 | RM | EcoOS292II (100% identity) | GAAABCC | EcoNE1127ORF25070P |
| 25075 | DEAD/DEAH box helicase | |||
| 25105 | N-acetylneuraminate epimerase | |||
| 25110 | R | Ecos1613ORF26795P (100% identity) | EcoNE1127ORF25110P | |
| 25115 | transposase | |||
| plasmid pNE1127-1 | ||||
| 29340 | 73 aa hypothetical protein | |||
| 29345 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoNE1127ORF29345P | |
| 29350 | 59 aa hypothetical protein | |||
| plasmid pNE1127-2 | ||||
| 28640 | 100 aa hypothetical protein | |||
| 28645 | M | M.YrupYR1ORFCP (100% identity) | M.EcoNE1127ORF28645P | |
| 28650 | 158 aa hypothetical protein | |||