Escherichia coli O157:H7 TB21-1 |
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Putative Escherichia coli O157:H7 TB21-1 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,498,884 bp | CP038292 |
| plasmid pTB21-1: | 95,611 bp | CP038293 |
REBASE acronym: EcoTB211
Org_num: 40048
All begin E4U65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24820 | DUF262 domain-containing protein | |||
| 24825 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoTB211ORF24830P |
| 24830 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoTB211ORF24830P |
| 24835 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoTB211ORF24830P |
| 24840 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | cell division protein DamX | |||
| 2345 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTB211DamP |
| 2350 | ribulose-phosphate 3-epimerase | |||
| 2865 | DUF2556 domain-containing protein | |||
| 2870 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoTB211ORF2870P |
| 2875 | DNA-binding transcriptional regulator Fis | |||
| 9855 | recombination protein NinB | |||
| 9860 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoTB211ORF9860P |
| 9865 | NinE family protein | |||
| 10740 | phosphohydrolase | |||
| 10745 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTB211DcmP |
| 10750 | V | V.EcosPA8DcmP (100% identity) | V.EcoTB211DcmP | |
| 10755 | drug/metabolite exporter YedA | |||
| 13525 | TrmB family transcriptional regulator | |||
| 13530 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoTB211ORF13530P | |
| 13535 | DUF1737 domain-containing protein | |||
| 14750 | TrmB family transcriptional regulator | |||
| 14755 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoTB211ORF14755P | |
| 14770 | 61 aa hypothetical protein | |||
| 23110 | LexA family transcriptional regulator | |||
| 23115 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoTB211ORF23115P |
| 23120 | PerC family transcriptional regulator | |||
| 25065 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoTB211ORF25065P |
| 25070 | DEAD/DEAH box helicase | |||
| 25100 | N-acetylneuraminate epimerase | |||
| 25105 | R | Ecos1613ORF26795P (100% identity) | EcoTB211ORF25105P | |
| 25110 | transposase | |||
| 25185 | 87 aa hypothetical protein | |||
| 25190 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoTB211ORF25190P |
| 25195 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoTB211ORF25190P |
| 25200 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoTB211ORF25190P |
| 25205 | DUF4102 domain-containing protein | |||
| plasmid pTB21-1 | ||||
| 28300 | 101 aa hypothetical protein | |||
| 28305 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoTB211ORF28305P | |
| 28310 | 73 aa hypothetical protein | |||