Escherichia coli SCU-485 |
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Putative Escherichia coli SCU-485 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 4,675,501 bp | CP053245 |
| plasmid pSCU-485-1: | 111,831 bp | CP053246 |
REBASE acronym: EcoSCU485
Org_num: 40078
All begin HHJ54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11830 | endoribonuclease SymE | |||
| 11835 | S | S.EcoSCI07ORF21813P (98% identity) | S.EcoSCU485ORF11840P | |
| 11840 | M | M.SspS13ORF3945P (100% identity) | M.EcoSCU485ORF11840P | |
| 11845 | R | EcoUTI89IIP (100% identity) | EcoSCU485ORF11840P | |
| 11850 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6145 | DNA-binding transcriptional regulator Fis | |||
| 6150 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCU485ORF6150P |
| 6155 | DUF2556 family protein | |||
| 6745 | ribulose-phosphate 3-epimerase | |||
| 6750 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU485DamP |
| 6755 | cell division protein DamX | |||
| 16175 | TraR/DksA family transcriptional regulator | |||
| 16180 | M | M.SflP099ORF15630P (100% identity) | GATC | M.EcoSCU485ORF16180P |
| 16185 | replication endonuclease | |||
| 22005 | drug/metabolite exporter YedA | |||
| 22010 | V | V.EcoTob1DcmP (100% identity) | V.EcoSCU485DcmP | |
| 22015 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU485DcmP |
| 22020 | phosphohydrolase | |||
| plasmid pSCU-485-1 | ||||
| 22945 | 73 aa hypothetical protein | |||
| 22950 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoSCU485ORF22950P |
| 22955 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11580 | 80 aa hypothetical protein | |||
| 11585 | M | M.EcosLF82ORF3195P (94% identity) | M.EcoSCU485ORF11585P | |
| 11590 | R | EcosLF82ORF3195P (94% identity) | EcoSCU485ORF11585P | |
| 11595 | 129 aa hypothetical protein | |||