Escherichia coli HB37 |
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Putative Escherichia coli HB37 RM systems
Ref: Pan,Y. and He,D. unpublished
REBASE ref # 30297
| Sequence length: | GenBank #: | |
| chromosome HB37: | 5,307,814 bp | CP053080 |
| plasmid pHB37-1: | 103,328 bp | CP053081 |
| plasmid pHB37-2: | 71,222 bp | CP053082 |
REBASE acronym: EcoHB37
Org_num: 40273
All begin HKW69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome HB37 | ||||
| 5465 | transposase | |||
| 5470 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoHB37ORF5475P |
| 5475 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoHB37ORF5475P |
| 5480 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoHB37ORF5475P |
| 5485 | AAA family ATPase | |||
| 21505 | DUF262 domain-containing protein | |||
| 21510 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | EcoHB37ORF21515P |
| 21515 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.EcoHB37ORF21515P |
| 21520 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.EcoHB37ORF21515P |
| 21525 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome HB37 | ||||
| 2470 | cell division protein DamX | |||
| 2475 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoHB37DamP |
| 2480 | ribulose-phosphate 3-epimerase | |||
| 3070 | DUF2556 family protein | |||
| 3075 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoHB37ORF3075P |
| 3080 | DNA-binding transcriptional regulator Fis | |||
| 7825 | DUF1382 family protein | |||
| 7830 | M | M.EfeC23ORF6940P (100% identity) | M.EcoHB37ORF7830P | |
| 7835 | PerC family transcriptional regulator | |||
| 11080 | phosphohydrolase | |||
| 11085 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoHB37DcmP |
| 11090 | V | V.SflC32DcmP (74% identity) | V.EcoHB37DcmP | |
| 11095 | drug/metabolite exporter YedA | |||
| 21235 | phage holin, lambda family | |||
| 21240 | M | M.Ecoi127aORF3990P (100% identity) | M.EcoHB37ORF21240P | |
| 21245 | 67 aa hypothetical protein | |||
| 21280 | LexA family transcriptional regulator | |||
| 21285 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoHB37ORF21285P |
| 21290 | PerC family transcriptional regulator | |||
| 21690 | HNH endonuclease | |||
| 21695 | R | Ecoi127aORF4076P (100% identity) | EcoHB37ORF21695P | |
| 21700 | 59 aa hypothetical protein | |||
| 21990 | cytochrome C oxidase Cbb3 | |||
| 21995 | M | M.EcosS3ORF15775P (100% identity) | M.EcoHB37ORF21995P | |
| 22000 | ATP-binding protein | |||
| plasmid pHB37-1 | ||||
| 25690 | 101 aa hypothetical protein | |||
| 25695 | M | M.Sso11ORF329P (100% identity) | M.EcoHB37ORF25695P | |
| 25700 | 73 aa hypothetical protein | |||
| plasmid pHB37-2 | ||||
| 26200 | 97 aa hypothetical protein | |||
| 26205 | M | M.Xca80ORFEP (100% identity) | M.EcoHB37ORF26205P | |
| 26210 | 73 aa hypothetical protein | |||