Escherichia coli C21 |
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Putative Escherichia coli C21 RM systems
Ref: Pan,Y. and He,D. unpublished
REBASE ref # 30297
| Sequence length: | GenBank #: | |
| Chromosome: | 4,757,725 bp | CP052877 |
| plasmid pC21-3: | 87,627 bp | CP052880 |
| plasmid pC21-4: | 93,854 bp | CP052881 |
REBASE acronym: EcoC21
Org_num: 39990
All begin HJD21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3340 | IS5-like element ISKpn26 family transposase | |||
| 3345 | R | EcoW25IIP (100% identity) | CACNNNNNNTCC | EcoC21ORF3355P |
| 3350 | S | S.Sen1467ORF14775P (99% identity) | CACNNNNNNTCC | S.EcoC21ORF3355P |
| 3355 | M | M.EcoW25II (93% identity) | CACNNNNNNTCC | M.EcoC21ORF3355P |
| 3360 | GTPase family protein | |||
| 14545 | GTPase family protein | |||
| 14550 | M | M.EcosEC21ORF13545P (100% identity) | M.EcoC21ORF14550P | |
| 14555 | IS1 family transposase | |||
| plasmid pC21-4 | ||||
| 24225 | type II toxin-antitoxin system Phd/YefM family | |||
| 24230 | M | M.EcoLH09aORF24620P (100% identity) | M.EcoC21ORF24230P | |
| 24235 | S | S.EcoLH09aORF24620P (100% identity) | S.EcoC21ORF24230P | |
| 24240 | R | EcoLH09aORF24620P (100% identity) | EcoC21ORF24230P | |
| 24245 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC21DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2200 | DUF2556 family protein | |||
| 2205 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC21ORF2205P |
| 2210 | DNA-binding transcriptional regulator Fis | |||
| 5570 | TraR/DksA family transcriptional regulator | |||
| 5575 | M | M.EcoVCSW8ORF5460P (100% identity) | GATC | M.EcoC21ORF5575P |
| 5580 | replication endonuclease | |||
| 9065 | phosphohydrolase | |||
| 9070 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC21DcmP |
| 9075 | V | V.SsoSE61DcmP (100% identity) | V.EcoC21DcmP | |
| 9080 | drug/metabolite exporter YedA | |||
| 19715 | HNH endonuclease | |||
| 19720 | R | EcosB2CORFAP (100% identity) | EcoC21ORF19720P | |
| 19725 | 118 aa hypothetical protein | |||
| plasmid pC21-3 | ||||
| 23515 | 101 aa hypothetical protein | |||
| 23520 | M | M.SflFF3ORF25360P (100% identity) | M.EcoC21ORF23520P | |
| 23525 | 73 aa hypothetical protein | |||
| plasmid pC21-4 | ||||
| 24340 | tellurite/colicin resistance protein | |||
| 24355 | M | M.EcoTHO010ORF40010P (99% identity) | M.EcoC21ORF24355P | |
| 24360 | recombination-associated protein RdgC | |||