Escherichia coli SCU-122 |
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Putative Escherichia coli SCU-122 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 4,911,026 bp | CP051714 |
| plasmid pSCU-122-1: | 114,224 bp | CP051715 |
REBASE acronym: EcoSCU122
Org_num: 40065
All begin HHJ35_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1785 | cell division protein DamX | |||
| 1790 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU122DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 family protein | |||
| 2390 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCU122ORF2390P |
| 2395 | DNA-binding transcriptional regulator Fis | |||
| 5980 | PerC family transcriptional regulator | |||
| 5985 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoSCU122ORF5985P |
| 5990 | LexA family transcriptional regulator | |||
| 9770 | phosphohydrolase | |||
| 9775 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU122DcmP |
| 9780 | V | V.EcosC25DcmP (100% identity) | V.EcoSCU122DcmP | |
| 9785 | drug/metabolite exporter YedA | |||
| 13025 | DUF1737 domain-containing protein | |||
| 13045 | M | M.SboBSORF1444P (100% identity) | A | M.EcoSCU122ORF13045P |
| 13050 | TrmB family transcriptional regulator | |||
| 19670 | McrC family protein | |||
| 19675 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoSCU122ORF19680P |
| 19680 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoSCU122ORF19680P |
| 19685 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoSCU122ORF19680P |
| 19690 | IS3 family transposase | |||
| 19935 | 174 aa hypothetical protein | |||
| 19940 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoSCU122ORF19940P |
| 19945 | histidine kinase | |||
| 19950 | 607 aa hypothetical protein | |||
| 19955 | R | EcoSCU306ORF19130P (100% identity) | EcoSCU122ORF19955P | |
| 19960 | 97 aa hypothetical protein | |||
| plasmid pSCU-122-1 | ||||
| 24020 | 73 aa hypothetical protein | |||
| 24025 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoSCU122ORF24025P |
| 24030 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6180 | recombinase family protein | |||
| 6185 | R | EspFAAGmrSDP (100% identity) | EcoSCU122GmrSDP | |
| 6190 | DinI-like family protein | |||
| 19660 | glycosyltransferase family 2 protein | |||
| 19665 | R | EcosS3McrBP (100% identity) | EcoSCU122McrBP | |
| 19670 | R | EcosS9McrCP (100% identity) | EcoSCU122McrCP | |
| 19675 | Alw26I/Eco31I/Esp3I family type II restriction | |||