Escherichia coli SCU-112 |
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Putative Escherichia coli SCU-112 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 5,094,645 bp | CP051725 |
| plasmid pSCU-112-1: | 103,780 bp | CP051726 |
REBASE acronym: EcoSCU112
Org_num: 40062
All begin HHJ29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20285 | DUF262 domain-containing protein | |||
| 20290 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoSCU112ORF20295P |
| 20295 | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoSCU112ORF20295P |
| 20300 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoSCU112ORF20295P |
| 20305 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU112DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 family protein | |||
| 2385 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCU112ORF2385P |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 9445 | phosphohydrolase | |||
| 9450 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU112DcmP |
| 9455 | V | V.EcosC25DcmP (100% identity) | V.EcoSCU112DcmP | |
| 9460 | drug/metabolite exporter YedA | |||
| 20665 | BREX-1 system phosphatase PglZ type A | |||
| 20670 | RM | Eco61218ORF6265P (100% identity) | EcoSCU112ORF20670P | |
| 20675 | BREX system P-loop protein BrxC | |||
| 21680 | ATP-binding protein | |||
| 21685 | M | M.EcosS3ORF15775P (100% identity) | M.EcoSCU112ORF21685P | |
| 21690 | conjugal transfer protein TraG | |||
| plasmid pSCU-112-1 | ||||
| 24770 | 73 aa hypothetical protein | |||
| 24775 | M | M.Sfl2142ORF380P (100% identity) | M.EcoSCU112ORF24775P | |
| 24780 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20525 | ATP-binding domain-containing protein | |||
| 20530 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoSCU112ORF20530P |
| 20535 | R | EcoUTI89IP (100% identity) | CACAG | EcoSCU112ORF20530P |
| 20540 | integrase arm-type DNA-binding domain-containing | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13335 | NinE family protein | |||
| 13340 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoSCU112ORF13340P |
| 13345 | recombination protein NinB | |||