Escherichia coli SFE8 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli SFE8 RM systems
Ref: He,J. unpublished
REBASE ref # 30307
| Sequence length: | GenBank #: | |
| Chromosome: | 5,061,372 bp | CP051219 |
| plasmid pSCZP1: | 107,230 bp | CP051220 |
REBASE acronym: EcoSFE8
Org_num: 40081
All begin HF527_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21115 | DUF4942 domain-containing protein | |||
| 21120 | M | M.SsoSE61ORF6540P (14% identity) | GACNNNNNNRTAAY | M.EcoSFE8ORF21120AP |
| 21125 | IS3 family transposase | |||
| 21130 | M | M.SsoSE61ORF6540P (85% identity) | GACNNNNNNRTAAY | M.EcoSFE8ORF21120BP |
| 21135 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.EcoSFE8ORF21120P |
| 21140 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoSFE8ORF21120P |
| 21150 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSFE8DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoSFE8ORF2335P |
| 2340 | DNA-binding transcriptional regulator Fis | |||
| 6070 | PerC family transcriptional regulator | |||
| 6075 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoSFE8ORF6075P |
| 6080 | LexA family transcriptional regulator | |||
| 10025 | phosphohydrolase | |||
| 10030 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoSFE8DcmP |
| 10035 | V | V.EcoS43DcmP (100% identity) | V.EcoSFE8DcmP | |
| 10040 | drug/metabolite exporter YedA | |||
| 15900 | replication endonuclease | |||
| 15905 | M | M.EcoMIN6ORF15505P (100% identity) | M.EcoSFE8ORF15905P | |
| 15910 | TraR/DksA family transcriptional regulator | |||
| 20290 | 55 aa hypothetical protein | |||
| 20295 | M | M.YpsF1ORFCP (100% identity) | M.EcoSFE8ORF20295P | |
| 20300 | thermonuclease family protein | |||
| plasmid pSCZP1 | ||||
| 24775 | 96 aa hypothetical protein | |||
| 24780 | M | M.Kpn1026ORFJP (100% identity) | M.EcoSFE8ORF24780P | |
| 24785 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6270 | recombinase family protein | |||
| 6275 | R | EcoWP2GmrSDP (96% identity) | EcoSFE8GmrSDP | |
| 6280 | DinI-like family protein | |||