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Putative Lactococcus raffinolactis Lr_19_5 RM systems
Ref: Ybazeta,G. et al. unpublished
REBASE ref # 30506
Sequence length: | GenBank #: | |
Chromosome: | 2,543,729 bp | CP047616 |
plasmid pLraf_19_5_1: | 82,612 bp | CP047617 |
REBASE acronym: Lra195
Org_num: 40622
All begin GU336_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
525 | 104 aa hypothetical protein | |||
530 | S | S.Lla895ORF495P (40% identity) | S.Lra195ORF535P | |
535 | M | M.Lra195ORF12830P (57% identity) | M.Lra195ORF535P | |
540 | 273 aa hypothetical protein | |||
10640 | 67 aa hypothetical protein | |||
10645 | R | LlaSD96ORF1906P (99% identity) | Lra195ORF10670P | |
10650 | molecular chaperone Tir | |||
10655 | 277 aa hypothetical protein | |||
10660 | S | S1.LlaA12ORF1262P (48% identity) | S2.Lra195ORF10670P | |
10665 | S | S1.Lla073II (45% identity) | S1.Lra195ORF10670P | |
10670 | M | M2.LlaA12ORF1262P (99% identity) | M.Lra195ORF10670P | |
10675 | IS6-like element ISS1N family transposase | |||
12115 | 67 aa hypothetical protein | |||
12120 | S | S.Lba1992II (63% identity) | S.Lra195ORF12125P | |
12125 | M | M.Lra195ORF12830P (99% identity) | M.Lra195ORF12125P | |
12130 | R | Lra195ORF12830P (99% identity) | Lra195ORF12125P | |
12135 | 122 aa hypothetical protein | |||
plasmid pLraf_19_5_1 | ||||
12820 | IS6-like element ISS1N family transposase | |||
12825 | S | S.Lbr15fORF11285P (62% identity) | S.Lra195ORF12830P | |
12830 | M | M.Lra195ORF12125P (99% identity) | M.Lra195ORF12830P | |
12835 | R | Lra195ORF12125P (99% identity) | Lra195ORF12830P | |
12840 | 122 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4510 | phosphoglycerate dehydrogenase | |||
4515 | M | M.Lra194SORF6320P (96% identity) | M.Lra195ORF4515P | |
4520 | RM | Lra194SORF6320P (84% identity) | Lra195ORF4515P | |
4525 | 199 aa hypothetical protein | |||
5915 | 72 aa hypothetical protein | |||
5920 | M | M.Lra12SORF5690P (85% identity) | M.Lra195ORF5920P | |
5925 | 133 aa hypothetical protein | |||
9275 | 133 aa hypothetical protein | |||
9280 | M | M.Lra12SORF5690P (97% identity) | M.Lra195ORF9280P | |
9285 | antirestriction protein ArdA | |||
9475 | IS30 family transposase | |||
9480 | M | M.LlaZZ2ORF8205P (74% identity) | M.Lra195ORF9480P | |
9485 | LytR family transcriptional regulator | |||
11185 | DEAD/DEAH box helicase family protein | |||
11190 | RM | LgaTac2ORFAP (69% identity) | Lra195ORF11190P | |
11195 | 50S ribosomal protein L33 | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2265 | MFS transporter | |||
2270 | R | Lpi21615ORF115P (99% identity) | Lra195ORF2275P | |
2275 | M | M.Lpi21615ORF115P (100% identity) | M.Lra195ORF2275P | |
2280 | helix-turn-helix domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10695 | 121 aa hypothetical protein | |||
10700 | R | Lra1914McrCP (98% identity) | Lra195McrCP | |
10705 | R | Lra1914McrBP (99% identity) | Lra195McrBP | |
10710 | 153 aa hypothetical protein |