Escherichia coli T16R |
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Putative Escherichia coli T16R RM systems
Ref: He,D. et al. unpublished
REBASE ref # 30309
| Sequence length: | GenBank #: | |
| Chromosome: | 4,639,361 bp | CP046716 |
| plasmid pT16R-1: | 190,391 bp | CP046717 |
| plasmid pT16R-2: | 172,892 bp | CP046718 |
REBASE acronym: EcoT16R
Org_num: 40083
All begin GPL39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11175 | DUF45 domain-containing protein | |||
| 11180 | R | Ecos195ORF10135P (100% identity) | EcoT16RORF11195P | |
| 11185 | UPF0149 family protein | |||
| 11190 | S | S.Ecos195ORF10135P (100% identity) | S.EcoT16RORF11195P | |
| 11195 | M | M.KpnLZORFCP (100% identity) | M.EcoT16RORF11195P | |
| 11200 | helix-turn-helix domain-containing protein | |||
| plasmid pT16R-2 | ||||
| 23905 | chromosome segregation protein SMC | |||
| 23910 | M | M.SenS1545ORF24780P (100% identity) | M.EcoT16RORF23910P | |
| 23915 | R | SenS1545ORF24780P (100% identity) | EcoT16RORF23910P | |
| 23920 | ANR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoT16RDamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 domain-containing protein | |||
| 2420 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoT16RORF2420P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 8600 | phosphohydrolase | |||
| 8605 | M | M.Ecos195DcmP (100% identity) | CCWGG | M.EcoT16RDcmP |
| 8610 | V | V.Ecos195DcmP (100% identity) | V.EcoT16RDcmP | |
| 8615 | drug/metabolite exporter YedA | |||
| 17520 | phage holin, lambda family | |||
| 17525 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoT16RORF17525P | |
| 17530 | 67 aa hypothetical protein | |||
| 17560 | LexA family transcriptional regulator | |||
| 17565 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoT16RORF17565P |
| 17570 | PerC family transcriptional regulator | |||
| plasmid pT16R-1 | ||||
| 22730 | 56 aa hypothetical protein | |||
| ??? | M | M.Sens770ORF21675P (100% identity) | M.EcoT16RORF22735P | |
| 22740 | nuclease | |||
| 23205 | DNA-binding protein | |||
| 23210 | M | M.Ype21801ORF197P (100% identity) | M.EcoT16RORF23210P | |
| 23215 | 273 aa hypothetical protein | |||