Salmonella enterica subsp. enterica NCTC6024 |
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Putative Salmonella enterica subsp. enterica NCTC6024 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,768,928 bp
GenBank #: UGXN00000000 (NZ_UGXN00000000)
REBASE acronym: Sen6024
Org_num: 42321
All begin NCTC6024_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4694 | malate transporter | |||
| ??? | R | SenR3019ORFDP (100% identity) | CCANNNNNGRTG | Sen6024IIIP |
| ??? | M | M.SenR3019ORFDP (100% identity) | CCANNNNNGRTG | M.Sen6024III |
| 4699 | S | S.Sen74111ORF19105P (100% identity) | CCANNNNNGRTG | S.Sen6024III |
| 4700 | HNH nuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 425 | DamX protein | |||
| 426 | M | M.StyTDamP (100% identity) | GATC | M.Sen6024Dam |
| 427 | ribulose-phosphate 3-epimerase | |||
| 541 | protein yhdU | |||
| 542 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen6024II |
| 543 | Fis DNA-binding protein | |||
| 1433 | C4-type zinc finger protein, DksA/TraR family | |||
| 1434 | M | M.SenSL491ORF2393P (100% identity) | M.Sen6024ORF1434P | |
| 1435 | Bacteriophage replication gene A protein (GPA) | |||
| 2218 | metal-dependent phospho hydrolase | |||
| 2219 | M | M.Sen6803DcmP (100% identity) | CCWGG | M.Sen6024DcmP |
| 2220 | V | V.StyUK1DcmP (100% identity) | V.Sen6024DcmP | |
| 2221 | inner membrane transporter yedA | |||
| 3417 | Uncharacterised protein | |||
| 3418 | M | M.Sen1379ORFAP (100% identity) | M.Sen6024ORF3418P | |
| 3419 | 110 aa conserved hypothetical bacteriophage protein | |||
| 4699 | restriction modification system DNA specificity | |||
| 4700 | R | SenRM074ORF19845P (100% identity) | GAAC | Sen6024ORF4700P |
| 4701 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4111 | cytoplasmic protein | |||
| 4112 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen6024IP |
| 4113 | M | M.SenC046ORF17340P (100% identity) | CAGAG | M.Sen6024I |
| 4114 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3166 | isocitrate dehydrogenase | |||
| 3167 | R | SsoSE61ORF22640P (100% identity) | YCGR | Sen6024ORF3167P |
| 3168 | Phage DNA invertase | |||