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Putative Salmonella enterica subsp. enterica NCTC5713 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,961,622 bp
GenBank #: UGXJ00000000 (NZ_UGXJ00000000)
REBASE acronym: Sen5713
Org_num: 42319
All begin NCTC5713_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4932 | restriction endonuclease | |||
??? | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5713IIIP |
??? | M | M.StyUK1II (99% identity) | GAGNNNNNNRTAYG | M.Sen5713III |
4939 | S | S.Sen12116III (24% identity) | GAGNNNNNNRTAYG | S1.Sen5713III |
4940 | S | S.StyUK1II (53% identity) | GAGNNNNNNRTAYG | S2.Sen5713III |
??? | S | S.EcoC13452ORF4043P (16% identity) | S3.Sen5713IIIP | |
4942 | membrane protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5784 | cytoplasmic protein | |||
5785 | M | M.StyUK1ORFAP (100% identity) | M.Sen5713ORF5785P | |
5786 | cytoplasmic protein | |||
461 | DamX protein | |||
462 | M | M.StyTDamP (100% identity) | GATC | M.Sen5713DamP |
463 | ribulose-phosphate 3-epimerase | |||
567 | protein yhdU | |||
??? | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5713ORF568P |
570 | Fis DNA-binding protein | |||
1461 | 174 aa conserved hypothetical bacteriophage protein | |||
1462 | M | M.StyTORF1914P (100% identity) | M.Sen5713ORF1462P | |
1463 | Uncharacterised protein | |||
2292 | phage protein | |||
2293 | M | M.StyUK1V (100% identity) | GATC | M.Sen5713ORF2293P |
2294 | crossover junction endodeoxyribonuclease | |||
2341 | metal-dependent phospho hydrolase | |||
2342 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen5713DcmP |
2343 | V | V.StyUK1DcmP (100% identity) | V.Sen5713DcmP | |
2344 | inner membrane transporter yedA | |||
4973 | DNA repair ATPase | |||
??? | RM | StyUK1IV (99% identity) | GATCAG | Sen5713II |
4978 | spermidine/putrescine ABC transporter ATPase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4340 | cytoplasmic protein | |||
4341 | R | StyUK1IP (99% identity) | CAGAG | Sen5713IP |
4342 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen5713I |
4343 | metabolite transport protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
4931 | membrane protein | |||
4932 | R | StyUK1MrrP (100% identity) | Sen5713MrrP | |
4933 | type I restriction enzyme EcoKI subunit R |