Escherichia coli NCTC9961 |
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Putative Escherichia coli NCTC9961 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,824,319 bp
GenBank #: UGDT00000000 (NZ_UGDT00000000)
REBASE acronym: EcoC9961
Org_num: 43869
All begin NCTC9961_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4159 | restriction endonuclease | |||
| 4160 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC9961I |
| 4161 | S | S.Ecou021ORF19870P (99% identity) | RTACNNNNGTG | S.EcoC9961I |
| 4162 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC9961IP |
| 4164 | protein YjiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4901 | IS66 family transposase orfB | |||
| ??? | M | M.Eco45S0C06ORF24735P (98% identity) | M.EcoC9961ORF4902P | |
| 4903 | cytoplasmic protein | |||
| 333 | DamX protein | |||
| 334 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC9961DamP |
| 335 | ribulose-phosphate 3-epimerase | |||
| 463 | membrane protein | |||
| 464 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC9961ORF464P |
| 465 | DNA-binding protein Fis | |||
| 1405 | recombination protein ninB from phage origin | |||
| 1406 | M | M.EphHK97DamP (100% identity) | GATC | M.EcoC9961ORF1406P |
| 1407 | protein ninX | |||
| 1866 | phosphohydrolase | |||
| 1867 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC9961DcmP |
| 1868 | V | V.SflSTLE3DcmP (100% identity) | V.EcoC9961DcmP | |
| 1869 | DMT superfamily transporter inner | |||
| 2056 | CPS-53 (KpLE1) prophage protein | |||
| 2057 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoC9961ORF2057P |
| 2058 | LexA repressor | |||
| 3192 | replication protein for prophage | |||
| 3193 | M | M.EcoWY5172ORF4620P (99% identity) | GATC | M.EcoC9961ORF3193P |
| 3194 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2074 | DNA invertase from prophage CP-933H | |||
| 2075 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoC9961ORF2075P |
| 2076 | isocitrate dehydrogenase | |||
| 2094 | tail fiber protein | |||
| 2096 | R | Ecos15955McrBP (100% identity) | EcoC9961McrBP | |
| 2097 | R | Ecos15955McrCP (100% identity) | EcoC9961McrCP | |
| 2098 | isocitrate dehydrogenase | |||