Escherichia coli NCTC9776 |
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Putative Escherichia coli NCTC9776 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,213,222 bp
GenBank #: UGAH00000000 (NZ_UGAH00000000)
REBASE acronym: EcoC9776
Org_num: 43865
All begin NCTC9776_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4541 | methylated adenine and cytosine restriction | |||
| 4542 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoC9776IP |
| 4543 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoC9776I |
| 4544 | S | S.EcoNORFEP (100% identity) | AACNNNNNNGTGC | S.EcoC9776I |
| 4546 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 493 | DamX protein | |||
| 494 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9776Dam |
| 495 | ribulose-phosphate 3-epimerase | |||
| 621 | membrane protein | |||
| 622 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC9776ORF622P |
| 623 | DNA-binding protein Fis | |||
| 2194 | phosphohydrolase | |||
| 2195 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC9776DcmP |
| 2196 | V | V.SflSTLE3DcmP (100% identity) | V.EcoC9776DcmP | |
| 2197 | DMT superfamily transporter inner | |||
| 2324 | antitermination protein from phage origin | |||
| 2325 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoC9776ORF2325P | |
| 2326 | R | R2.EcosS3ORF2905P (100% identity) | EcoC9776ORF2325P | |
| 2327 | Uncharacterized conserved protein | |||
| 2328 | lipoprotein | |||
| 2329 | M | M.EcoUS12ORF13970P (100% identity) | A | M.EcoC9776ORF2329P |
| 2334 | Lysis protein S | |||
| 2890 | Uncharacterized conserved protein | |||
| 2891 | M | M.Sen58011ORF9805P (100% identity) | M.EcoC9776ORF2891P | |
| 2892 | prophage protein | |||
| 4619 | prophage polarity suppression protein | |||
| 4620 | R | Ema814ORF11595P (100% identity) | CCTNNNNNAGG | EcoC9776IIP |
| 4621 | C | C.Ema814ORF11595P (100% identity) | C.EcoC9776IIP | |
| 4622 | M | M.EcoNI (100% identity) | CCTNNNNNAGG | M.EcoC9776II |
| 4623 | site-specific recombinase, phage integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4540 | GTP-binding protein YjiA | |||
| 4541 | R | SenHNK130MrrP (100% identity) | EcoC9776MrrP | |
| 4542 | type I restriction enzyme EcoKI subunit R | |||
| 4544 | EcoKI restriction-modification system protein | |||
| ??? | R | EcoNMcrBP (98% identity) | EcoC9776McrBP | |
| 4547 | R | SenHNK130McrCP (100% identity) | EcoC9776McrCP | |