Escherichia coli NCTC9095 |
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Putative Escherichia coli NCTC9095 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,044,758 bp
GenBank #: UGDN00000000 (NZ_UGDN00000000)
REBASE acronym: Eco9095
Org_num: 43838
All begin NCTC9095_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3279 | ybl103 | |||
| 3280 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTNG | M.Eco9095I |
| 3281 | S | S.EcoR8ORF20135P (100% identity) | GAGNNNNNGTNG | S.Eco9095I |
| 3282 | Uncharacterised protein | |||
| 3283 | RNase III inhibitor | |||
| 3284 | R | Sbo49812IP (100% identity) | GAGNNNNNGTNG | Eco9095IP |
| 3285 | hydrolase | |||
| 4324 | restriction methylase | |||
| 4325 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNTGAA | M.Eco9095II |
| 4326 | S | S.Eco9050II (100% identity) | CCANNNNNNNTGAA | S.Eco9095II |
| 4327 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNTGAA | Eco9095IIP |
| 4328 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 452 | DamX protein | |||
| 453 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9095DamP |
| 454 | ribulose-phosphate 3-epimerase | |||
| 582 | membrane protein | |||
| 583 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9095ORF583P |
| 584 | DNA-binding protein Fis | |||
| 1232 | TraR/DksA family transcriptional regulator | |||
| 1233 | M | M.EcoLR291ORF28490P (99% identity) | GATC | M.Eco9095ORF1233P |
| 1234 | replication protein for prophage | |||
| 1990 | phosphohydrolase | |||
| 1991 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco9095DcmP |
| 1992 | V | V.Ecop10ADcmP (99% identity) | V.Eco9095DcmP | |
| 1993 | DMT superfamily transporter inner | |||
| 2405 | Uncharacterised protein | |||
| 2406 | M | M.EcaEb1ORF9855P (97% identity) | M.Eco9095ORF2406P | |
| 2407 | C4-type zinc finger protein | |||
| 2410 | ybl17 | |||
| 2411 | M | M2.Eho564ORF16120P (100% identity) | M1.Eco9095ORF2411P | |
| 2412 | M | M1.Eho564ORF16120P (97% identity) | M2.Eco9095ORF2411P | |
| 2413 | Uncharacterised protein | |||
| 2522 | exonuclease from phage origin | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9095ORF2523P | |
| 2524 | membrane protein | |||
| 2884 | phage protein | |||
| 2890 | M | M.EcoUS12ORF13970P (100% identity) | A | M.Eco9095ORF2890P |
| 2891 | lipoprotein | |||
| 4320 | YjhS protein | |||
| 4321 | R | SflSTLE4ORF19250P (100% identity) | Eco9095ORF4321P | |
| 4322 | McrC family protein, McrBC 5-methylcytosine | |||
| 4400 | acetoacetate metabolism regulator (two-component | |||
| 4401 | R | EcoE1441ORF4219P (100% identity) | Eco9095ORF4401P | |
| 4402 | transposase subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1938 | Insertion element protein | |||
| 1939 | M | M.Kqu747ORF9870P (67% identity) | M.Eco9095ORF1939P | |
| 1940 | R | SenUJ816AORFEP (96% identity) | Eco9095ORF1939P | |
| 1941 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4321 | restriction endonuclease | |||
| 4322 | R | SflSTLE4McrCP (100% identity) | Eco9095McrCP | |
| 4323 | R | SflSTLE4McrBP (100% identity) | Eco9095McrBP | |
| 4324 | restriction methylase | |||