Escherichia coli NCTC9089 |
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Putative Escherichia coli NCTC9089 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,865,123 bp
GenBank #: UGCX00000000 (NZ_UGCX00000000)
REBASE acronym: Eco9089
Org_num: 43834
All begin NCTC9089_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4864 | restriction endonuclease | |||
| 4865 | M | M.EcoS51ORF20965P (100% identity) | GAAGNNNNNTGG | M.Eco9089I |
| 4866 | S | S.EcoS51ORF20965P (8% identity) | S1.Eco9089IP | |
| 4867 | S | S.EcoS51ORF20965P (83% identity) | GAAGNNNNNTGG | S2.Eco9089I |
| 4868 | R | EcoS51ORF20965P (100% identity) | GAAGNNNNNTGG | Eco9089IP |
| 4870 | protein YjiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 504 | DamX protein | |||
| ??? | M | M.EcoMEC0003DamP (98% identity) | GATC | M.Eco9089DamP |
| 507 | ribulose-phosphate 3-epimerase | |||
| 629 | membrane protein | |||
| 630 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco9089ORF630P |
| 631 | DNA-binding protein Fis | |||
| 2235 | phosphohydrolase | |||
| 2236 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco9089DcmP |
| 2237 | V | V.SsoSE61DcmP (100% identity) | V.Eco9089DcmP | |
| 2238 | DMT superfamily transporter inner | |||
| 2734 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9089ORF2735P | |
| 2736 | prophage protein | |||
| 3341 | phage holin | |||
| ??? | M | M.EcoUVM2ORF200P (100% identity) | M.Eco9089ORF3343P | |
| 3345 | lipoprotein | |||
| 3740 | replication protein for prophage | |||
| 3741 | M | M.SflLIN8ORF15450P (100% identity) | GATC | M.Eco9089ORF3741P |
| 3742 | TraR/DksA family transcriptional regulator | |||