Escherichia coli NCTC9081 |
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Putative Escherichia coli NCTC9081 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,417,719 bp
GenBank #: UGCV00000000 (NZ_UGCV00000000)
REBASE acronym: Eco9081
Org_num: 43831
All begin NCTC9081_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1830 | Uncharacterized conserved protein | |||
| ??? | S | S.EcoO81ORFCP (34% identity) | CGAYNNNNNNNRTDCC | S4.Eco9081I |
| 1832 | S | S.SflPE577ORF23095P (9% identity) | S3.Eco9081IP | |
| 1833 | S | S.EcoO81ORFCP (15% identity) | S2.Eco9081IP | |
| 1834 | S | S.EcoO81ORFCP (34% identity) | CGAYNNNNNNNRTDCC | S1.Eco9081I |
| 1835 | Uncharacterised protein | |||
| 1836 | M | M.SspS13ORF3945P (71% identity) | CGAYNNNNNNNRTDCC | M.Eco9081I |
| ??? | R | EcoO81ORFCP (99% identity) | CGAYNNNNNNNRTDCC | Eco9081IP |
| 1840 | Uncharacterized conserved protein | |||
| 2283 | transposase | |||
| ??? | M | M.EcoO81ORFAP (100% identity) | M.Eco9081ORF2284P | |
| 2287 | radical SAM superfamily protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25 | outer membrane protein F | |||
| ??? | M | M.Eco11473DcmP (98% identity) | CCWGG | M.Eco9081DcmP |
| 29 | V | V.EcoTH9F11DcmP (100% identity) | V.Eco9081DcmP | |
| 30 | DMT superfamily transporter inner | |||
| 830 | DamX protein | |||
| 831 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9081DamP |
| 832 | ribulose-phosphate 3-epimerase | |||
| 968 | membrane protein | |||
| 969 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco9081ORF969P |
| 970 | DNA-binding protein Fis | |||
| 2452 | Uncharacterised protein | |||
| 2453 | M | M.EcoSO173ORF23940P (100% identity) | M.Eco9081ORF2453P | |
| 2454 | 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | |||
| 3037 | TraR/DksA family transcriptional regulator | |||
| 3038 | M | M.EcoC9110ORF3137P (100% identity) | GATC | M.Eco9081ORF3038P |
| 3039 | replication protein for prophage | |||
| 3796 | lipoprotein | |||
| 3797 | M | M.EcoSCU103ORF10815P (99% identity) | M.Eco9081ORF3797P | |
| 3800 | TolA protein (fragment) of prophage | |||
| 5020 | Ant antirepressor protein from prophage | |||
| 5023 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco9081ORF5023P |
| 5024 | prophage protein ninB | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3221 | Uncharacterised protein | |||
| 3222 | M | M.EcoR5ORF15805P (96% identity) | M.Eco9081ORF3222P | |
| 3223 | Uncharacterised protein | |||