Escherichia coli NCTC9067 |
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Putative Escherichia coli NCTC9067 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,290,509 bp
GenBank #: UGBZ00000000 (NZ_UGBZ00000000)
REBASE acronym: Eco9067
Org_num: 43821
All begin NCTC9067_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3992 | UvrD family helicase | |||
| 3993 | R | Cbr9ORF3895P (99% identity) | GTAANNNNNGTG | Eco9067IP |
| 3994 | Uncharacterised protein | |||
| 3995 | S | S.CbrSEC08ORF3300P (58% identity) | GTAANNNNNGTG | S.Eco9067I |
| 3996 | M | M.Csp881ORF19425P (98% identity) | GTAANNNNNGTG | M.Eco9067I |
| 3997 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 354 | DamX protein | |||
| 355 | M | M.CspTSA1DamP (100% identity) | GATC | M.Eco9067DamP |
| 356 | ribulose-phosphate 3-epimerase | |||
| 467 | membrane protein | |||
| 468 | M | M.CspTSA1ORF2105P (100% identity) | ATGCAT | M.Eco9067IV |
| 469 | DNA-binding protein Fis | |||
| 1165 | Uncharacterised protein | |||
| 1166 | M | M.Cbr1b1ORF4270P (99% identity) | M.Eco9067ORF1166P | |
| 1167 | Uncharacterised protein | |||
| 1942 | phage O protein family | |||
| 1943 | M | M1.CbrC05ORF10225P (100% identity) | M.Eco9067ORF1943P | |
| 1944 | DNA (cytosine-5-)-methyltransferase | |||
| 1943 | phage AdoMet-dependent | |||
| 1944 | M | M1.Cfr408ORF13220P (99% identity) | M.Eco9067ORF1944P | |
| 1945 | Crossover junction | |||
| 1951 | lipoprotein | |||
| 1952 | M | M.Cfr502ORF8225P (99% identity) | M.Eco9067ORF1952P | |
| 1953 | Uncharacterised protein | |||
| 2226 | phosphohydrolase | |||
| ??? | M | M.CbrE4C01ORF8935P (100% identity) | CCWGG | M.Eco9067ORF2227P |
| 2228 | V | V.CspC21ORF10370P (100% identity) | V.Eco9067ORF2227P | |
| 2229 | DMT superfamily transporter inner | |||
| 3386 | replication protein for prophage | |||
| 3387 | M | M.EmoBC01ORF21670P (96% identity) | M.Eco9067ORF3387P | |
| 3388 | TraR/DksA family transcriptional regulator | |||
| 4397 | Uncharacterised protein | |||
| 4398 | R | CbrF418ORF20660P (98% identity) | Eco9067ORF4398P | |
| 4399 | transposase | |||
| 4878 | Uncharacterised protein | |||
| 4879 | M | M.CfrC05ORF23215P (97% identity) | M.Eco9067ORF4879P | |
| 4880 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 711 | CP4-6 prophage protein | |||
| 712 | M | M.CfrF3221ORF4545P (100% identity) | M.Eco9067ORF712P | |
| 713 | transposase | |||
| 773 | Uncharacterised protein | |||
| 774 | R | Emo1412ORF19075P (100% identity) | AACACC | Eco9067IIIP |
| 775 | M | M.Emo1412ORF19075P (100% identity) | AACACC | M.Eco9067III |
| 776 | Uncharacterized protein conserved in bacteria | |||
| 4420 | DNA-directed RNA polymerase, beta subunit/140 kD | |||
| 4421 | M | M.Kgr555ORF24875P (100% identity) | CCACCG | M.Eco9067II |
| 4422 | R | Kgr555ORF24875P (100% identity) | CCACCG | Eco9067IIP |
| 4423 | Predicted HKD family nuclease | |||