Escherichia coli NCTC9053 |
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Putative Escherichia coli NCTC9053 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,874,184 bp
GenBank #: UGEH00000000 (NZ_UGEH00000000)
REBASE acronym: Eco9053
Org_num: 43814
All begin NCTC9053_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4052 | methylated adenine and cytosine restriction | |||
| ??? | R | Ecos15955ORF12100P (99% identity) | RTCANNNNNNNCTTC | Eco9053IIP |
| 4054 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco9053II |
| 4055 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco9053II |
| 4057 | DEAD-box helicase-like protein | |||
| 4359 | Uncharacterized conserved protein | |||
| 4360 | S | S.Kpn1401ORF4490P (100% identity) | GTAYNNNNNTTTA | S.Eco9053I |
| ??? | M | M.Kpn1401ORF4490P (100% identity) | GTAYNNNNNTTTA | M.Eco9053I |
| 4363 | ybl103 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 359 | DamX protein | |||
| 360 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9053DamP |
| 361 | ribulose-phosphate 3-epimerase | |||
| 487 | membrane protein | |||
| 488 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9053ORF488P |
| 489 | DNA-binding protein Fis | |||
| 1889 | phosphohydrolase | |||
| 1890 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco9053DcmP |
| 1891 | V | V.EcosEC7DcmP (100% identity) | V.Eco9053DcmP | |
| 1892 | DMT superfamily transporter inner | |||
| 2296 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9053ORF2297P | |
| 2298 | membrane protein | |||
| 3035 | replication protein for prophage | |||
| 3036 | M | M.Sen8466ORF10450P (100% identity) | GATC | M.Eco9053ORF3036P |
| 3037 | TraR/DksA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1153 | CP4-6 prophage; putative GTP-binding protein | |||
| 1154 | M | M.EcoR15ORF21180P (100% identity) | M.Eco9053ORF1154P | |
| 1155 | R | EcoR15ORF21180P (100% identity) | Eco9053ORF1154P | |
| 1156 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4051 | GTP-binding protein YjiA | |||
| 4052 | R | Ssp28760MrrP (100% identity) | Eco9053MrrP | |
| 4053 | type I restriction enzyme EcoKI subunit R | |||