Escherichia coli NCTC9012 |
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Putative Escherichia coli NCTC9012 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,272,149 bp
GenBank #: UGCA00000000 (NZ_UGCA00000000)
REBASE acronym: Eco9012
Org_num: 43788
All begin NCTC9012_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2578 | restriction methylase | |||
| 2579 | M | M.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | M.Eco9012I |
| 2580 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco9012I |
| 2581 | R | EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | Eco9012IP |
| 2582 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 203 | phosphohydrolase | |||
| 204 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco9012DcmP |
| 205 | V | V.SsoSE61DcmP (100% identity) | V.Eco9012DcmP | |
| 206 | DMT superfamily transporter inner | |||
| 2574 | YjhS protein | |||
| 2575 | R | EcoSCU103ORF3050P (100% identity) | Eco9012ORF2575P | |
| 2576 | McrC family protein, McrBC 5-methylcytosine | |||
| 4073 | DNA-binding protein Fis | |||
| 4074 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9012ORF4074P |
| 4075 | membrane protein | |||
| 1597 | regulator | |||
| 1598 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco9012ORF1598P | |
| 1599 | Uncharacterised protein | |||
| 4202 | ribulose-phosphate 3-epimerase | |||
| 4203 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9012Dam |
| 4204 | DamX protein | |||
| 4526 | IS2 element protein | |||
| 4527 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco9012ORF4528P |
| ??? | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco9012ORF4528P |
| 4529 | transposase, ORF A, IS3 family, IS407 group | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2575 | restriction endonuclease | |||
| 2576 | R | SflSTLE4McrCP (100% identity) | Eco9012McrCP | |
| 2577 | R | SflSTLE4McrBP (100% identity) | Eco9012McrBP | |
| 2578 | restriction methylase | |||