Escherichia coli NCTC9004 |
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Putative Escherichia coli NCTC9004 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,167,589 bp
GenBank #: UGCR00000000 (NZ_UGCR00000000)
REBASE acronym: Eco9004
Org_num: 43781
All begin NCTC9004_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4414 | restriction endonuclease | |||
| 4415 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.Eco9004I |
| 4416 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco9004I |
| 4417 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco9004IP |
| 4419 | fused DNA-binding transcriptional regulator; | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 129 | Uncharacterised protein | |||
| ??? | M | M2.EcoR60ORF15915P (100% identity) | M1.Eco9004ORF130P | |
| ??? | M | M1.EcoR60ORF15915P (100% identity) | M2.Eco9004ORF130P | |
| 134 | integrase | |||
| 507 | DamX protein | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9004DamP |
| 510 | ribulose-phosphate 3-epimerase | |||
| 644 | membrane protein | |||
| ??? | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco9004ORF645P |
| 646 | DNA-binding protein Fis | |||
| 1509 | serine/threonine-specific protein phosphatase 1 | |||
| 1510 | M | M.Eco780ORF8365P (100% identity) | M.Eco9004ORF1510P | |
| 1511 | transcriptional activator from phage | |||
| 2236 | phosphohydrolase | |||
| ??? | M | M.Eco10863DcmP (99% identity) | CCWGG | M.Eco9004DcmP |
| 2238 | V | V.EcoYP3DcmP (100% identity) | V.Eco9004DcmP | |
| 2239 | DMT superfamily transporter inner | |||