Escherichia coli NCTC9002 |
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Putative Escherichia coli NCTC9002 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,182,238 bp
GenBank #: UGFD00000000 (NZ_UGFD00000000)
REBASE acronym: Eco9002
Org_num: 43779
All begin NCTC9002_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4108 | Uncharacterised protein | |||
| 4109 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco9002IP |
| 4110 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco9002I |
| 4111 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco9002I |
| 4113 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4877 | cytoplasmic protein | |||
| 4878 | M | M.SensS499ORF26615P (99% identity) | M.Eco9002ORF4878P | |
| 4879 | YfdA | |||
| 4951 | cytoplasmic protein | |||
| ??? | M | M.Eco9002ORF4878P (97% identity) | M.Eco9002ORF4952P | |
| 4953 | YfdA | |||
| 361 | DamX protein | |||
| 362 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9002DamP |
| 363 | ribulose-phosphate 3-epimerase | |||
| 484 | membrane protein | |||
| 485 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco9002ORF485P |
| 486 | DNA-binding protein Fis | |||
| 1217 | CPS-53 (KpLE1) prophage protein | |||
| 1218 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco9002ORF1218P |
| 1219 | LexA repressor | |||
| 2094 | phosphohydrolase | |||
| 2095 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco9002DcmP |
| 2096 | V | V.EcosEC7DcmP (100% identity) | V.Eco9002DcmP | |
| 2097 | DMT superfamily transporter inner | |||
| 2727 | phage protein YjhS encoded within prophage | |||
| 2733 | M | M.EcoY26ORF70P (100% identity) | A | M.Eco9002ORF2733P |
| 2734 | lipoprotein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1258 | DNA invertase | |||
| 1259 | R | EspFAAGmrSDP (100% identity) | Eco9002GmrSDP | |
| 1260 | Uncharacterised protein | |||
| 4111 | Type I restriction enzyme EcoAI specificity | |||
| 4113 | R | Eho218GmrDP (100% identity) | Eco9002GmrD2P | |
| 4114 | transposase YhgA-like protein | |||