Escherichia coli NCTC8621 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC8621 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,251,194 bp
GenBank #: UGBW00000000 (NZ_UGBW00000000)
REBASE acronym: Eco8621
Org_num: 43772
All begin NCTC8621_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4513 | DNA primase | |||
| 4514 | R | EcoDCE7ORF18445P (100% identity) | TTANNNNNNRTCC | Eco8621IP |
| 4515 | S | S.EcoDCE7ORF18445P (100% identity) | TTANNNNNNRTCC | S.Eco8621I |
| 4516 | M | M.EcoDCE7ORF18445P (100% identity) | TTANNNNNNRTCC | M.Eco8621I |
| 4517 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 440 | DamX protein | |||
| ??? | M | M.Eco34C04DamP (100% identity) | GATC | M.Eco8621DamP |
| 442 | phosphoglycolate phosphatase | |||
| 548 | membrane protein | |||
| 549 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco8621ORF549P |
| 550 | DNA-binding protein Fis | |||
| 1330 | Tfp pilus assembly protein, major pilin PilA | |||
| 1331 | M | M.Ecos154ORF1441P (100% identity) | M.Eco8621ORF1331P | |
| 1332 | translation inhibitor protein RaiA | |||
| 1588 | CPS-53 (KpLE1) prophage protein | |||
| 1589 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco8621ORF1589P |
| 1590 | LexA repressor | |||
| 1874 | lipoprotein | |||
| 1875 | M | M.Eco10002ORF2666P (100% identity) | M.Eco8621ORF1875P | |
| 1879 | tellurite resistance protein TciA | |||
| 2168 | phosphohydrolase | |||
| 2169 | M | M.EcoDCE7DcmP (100% identity) | CCWGG | M.Eco8621DcmP |
| 2170 | V | V.EcoSC477DcmP (100% identity) | V.Eco8621DcmP | |
| 2171 | DMT superfamily transporter inner | |||
| 3165 | anti-adapter protein IraM | |||
| 3169 | M | M.EcoS7438ORFNP (100% identity) | M.Eco8621ORF3169P | |
| 3170 | lipoprotein | |||
| 3506 | replication protein for prophage | |||
| 3507 | M | M.Eco941ORF6380P (100% identity) | GATC | M.Eco8621ORF3507P |
| 3508 | TraR/DksA family transcriptional regulator | |||
| 4118 | Flagellar basal-body P-ring formation protein | |||
| ??? | M | M.Eco34C04ORF4540P (100% identity) | M.Eco8621ORF4119P | |
| 4120 | R | EcoS7438ORFEP (100% identity) | Eco8621ORF4119P | |
| 4121 | lateral flagellar anti-sigma factor 28 protein | |||
| 4437 | phage lysis protein | |||
| 4438 | M | M.Sso63633ORF22290P (100% identity) | M.Eco8621ORF4438P | |
| 4439 | Uncharacterised protein | |||
| 4520 | McrC family protein, McrBC 5-methylcytosine | |||
| 4521 | R | EcoC84497ORFJP (96% identity) | Eco8621ORF4521P | |
| 4522 | endonuclease | |||
| 4602 | replication protein from phage | |||
| 4603 | M | M.EcocdtDamP (93% identity) | GATC | M.Eco8621ORF4603P |
| 4604 | LexA repressor | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4518 | Uncharacterised protein | |||
| 4519 | R | Eco10002McrBP (100% identity) | Eco8621McrBP | |
| 4520 | R | Eco10002McrCP (100% identity) | Eco8621McrCP | |
| 4521 | restriction endonuclease | |||