Escherichia coli NCTC7362 |
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Putative Escherichia coli NCTC7362 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,978,103 bp
GenBank #: UGDV00000000 (NZ_UGDV00000000)
REBASE acronym: Eco7362
Org_num: 43754
All begin NCTC7362_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4191 | Uncharacterised protein | |||
| 4192 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco7362II |
| 4193 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco7362II |
| 4194 | membrane protein | |||
| 4214 | DNA-binding transcriptional regulator | |||
| 4215 | R | EcohubtORF20055P (100% identity) | CRAANNNNNNGTRC | Eco7362IP |
| 4216 | M | M.EcohubtORF20055P (100% identity) | CRAANNNNNNGTRC | M.Eco7362I |
| 4217 | S | S.EcohubtORF20055P (90% identity) | CRAANNNNNNGTRC | S.Eco7362I |
| 4218 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25 | cytoplasmic protein | |||
| 26 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco7362ORF26P |
| 27 | YfdA | |||
| 492 | DamX protein | |||
| 493 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco7362DamP |
| 494 | ribulose-phosphate 3-epimerase | |||
| 605 | membrane protein | |||
| 606 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco7362ORF606P |
| 607 | DNA-binding protein Fis | |||
| 1949 | phosphohydrolase | |||
| 1950 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco7362DcmP |
| 1951 | V | V.SsoSE61DcmP (100% identity) | V.Eco7362DcmP | |
| 1952 | DMT superfamily transporter inner | |||
| 2358 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco7362ORF2359P | |
| 2360 | membrane protein | |||
| 3168 | replication protein for prophage | |||
| 3169 | M | M.EcohubtORF7795P (100% identity) | GATC | M.Eco7362ORF3169P |
| 3170 | TraR/DksA family transcriptional regulator | |||
| 4187 | YjhS protein | |||
| 4188 | R | EcohubtORF19915P (100% identity) | Eco7362ORF4188P | |
| 4189 | endonuclease | |||
| 4220 | 5-nucleotidase | |||
| 4221 | R | EcohubtORF20080P (100% identity) | GAAC | Eco7362ORF4221P |
| 4222 | integrase family protein | |||
| 4621 | Uncharacterised protein | |||
| 4622 | M | M.EcosE2ORF21575P (100% identity) | M.Eco7362ORF4622P | |
| 4623 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4188 | restriction endonuclease | |||
| 4189 | R | SflN101McrBP (100% identity) | Eco7362McrBP | |
| 4190 | R | EcohubtMcrCP (100% identity) | Eco7362McrCP | |
| 4191 | Uncharacterised protein | |||