Escherichia coli NCTC13450 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC13450 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,649,803 bp
GenBank #: UFZX00000000 (NZ_UFZX00000000)
REBASE acronym: Eco13450
Org_num: 43742
All begin NCTC13450_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3810 | methylated adenine and cytosine restriction | |||
| ??? | R | Esp17TGCORF18925P (100% identity) | AACNNNNNNGTGC | Eco13450IP |
| 3813 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco13450I |
| 3814 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco13450I |
| 3816 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4533 | cytoplasmic protein | |||
| 4534 | M | M.Xca80ORFEP (100% identity) | M.Eco13450ORF4534P | |
| 4535 | plasmid segregation protein | |||
| 336 | DamX protein | |||
| 337 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13450DamP |
| 338 | ribulose-phosphate 3-epimerase | |||
| 464 | membrane protein | |||
| 465 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco13450ORF465P |
| 466 | DNA-binding protein Fis | |||
| 1780 | phosphohydrolase | |||
| 1781 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco13450Dcm |
| 1782 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco13450DcmP |
| 1783 | DMT superfamily transporter inner | |||
| 2564 | Xis | |||
| ??? | M | M.EcoNEB10bORF6575P (100% identity) | M.Eco13450ORF2566P | |
| 2567 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2674 | isocitrate dehydrogenase | |||
| 2675 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco13450ORF2675P |
| 2676 | DNA invertase from prophage CP-933H | |||
| 3809 | GTP-binding protein YjiA | |||
| 3810 | R | SenHNK130MrrP (100% identity) | Eco13450MrrP | |
| 3811 | type I restriction enzyme EcoKI subunit R | |||
| 3814 | EcoKI restriction-modification system protein | |||
| ??? | R | SenHNK130McrBP (100% identity) | Eco13450McrBP | |
| 3817 | R | SenHNK130McrCP (100% identity) | Eco13450McrCP | |
| 3818 | DEAD-box helicase-like protein | |||