Escherichia coli NCTC11474 |
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Putative Escherichia coli NCTC11474 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,231,980 bp
GenBank #: UGCI00000000 (NZ_UGCI00000000)
REBASE acronym: Eco11474
Org_num: 43720
All begin NCTC11474_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 382 | Uncharacterised protein | |||
| 383 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | Eco11474IIIP |
| 384 | S | S.Eco899037ORF23950P (100% identity) | ACYNNNNNNGTTC | S.Eco11474III |
| 385 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.Eco11474III |
| 386 | addiction module antitoxin | |||
| 4423 | methylated adenine and cytosine restriction | |||
| 4424 | type I restriction enzyme EcoKI subunit R | |||
| 4547 | ATP-binding protein | |||
| 4548 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco11474II |
| 4549 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco11474II |
| 4550 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | Eco11474IIP |
| 4551 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 204 | YfdA | |||
| 205 | M | M.SsoST152ORF25555P (99% identity) | M.Eco11474ORF205P | |
| 206 | cytoplasmic protein | |||
| 99 | cytoplasmic protein | |||
| 100 | M | M.EcoR3001ORF25605P (100% identity) | M.Eco11474ORF100P | |
| 101 | YfdA | |||
| 290 | YfdA | |||
| ??? | M | M.Eco11474ORF205P (87% identity) | M.Eco11474ORF291P | |
| 710 | DamX protein | |||
| 711 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11474DamP |
| 712 | ribulose-phosphate 3-epimerase | |||
| 826 | membrane protein | |||
| 827 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco11474ORF827P |
| 828 | DNA-binding protein Fis | |||
| 1178 | ImpA domain protein | |||
| 1179 | M | M.Eco26fORF12195P (100% identity) | M.Eco11474ORF1179P | |
| 1180 | histidin kinase-like protein | |||
| 2240 | phosphohydrolase | |||
| 2241 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco11474DcmP |
| 2242 | V | V.SflFF59DcmP (100% identity) | V.Eco11474DcmP | |
| 2243 | DMT superfamily transporter inner | |||
| 2660 | lipoprotein | |||
| 2661 | M | M.EcoH3ORF13800P (100% identity) | M.Eco11474ORF2661P | |
| 2664 | phage holin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4422 | GTP-binding protein YjiA | |||
| 4423 | R | EcoE1779MrrP (100% identity) | Eco11474Mrr2P | |
| 4424 | type I restriction enzyme EcoKI subunit R | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2787 | TraR/DksA family transcriptional regulator | |||
| 2788 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco11474ORF2788P |
| 2789 | replication protein for prophage | |||