Escherichia coli NCTC11128 |
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Putative Escherichia coli NCTC11128 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,874,314 bp
GenBank #: UGAY00000000 (NZ_UGAY00000000)
REBASE acronym: Eco11128
Org_num: 43711
All begin NCTC11128_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3975 | Uncharacterised protein | |||
| 3976 | M | M.EcohubtORF19935P (100% identity) | TGGANNNNNNTCA | M.Eco11128II |
| 3977 | S | S.SflN101ORF11895P (100% identity) | TGGANNNNNNTCA | S.Eco11128II |
| 3978 | membrane protein | |||
| 3998 | DNA-binding transcriptional regulator | |||
| ??? | R | EcohubtORF20055P (100% identity) | CRAANNNNNNGTRC | Eco11128IP |
| 4001 | M | M.EcohubtORF20055P (100% identity) | CRAANNNNNNGTRC | M.Eco11128I |
| ??? | hypothetical protein | |||
| 4001 | DNA methylase M | |||
| ??? | S | S.EcohubtORF20055P (90% identity) | S.Eco11128ORF4001P | |
| 4004 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 360 | DamX protein | |||
| 361 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11128DamP |
| 362 | ribulose-phosphate 3-epimerase | |||
| 473 | membrane protein | |||
| 474 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco11128ORF474P |
| 475 | DNA-binding protein Fis | |||
| 1778 | phosphohydrolase | |||
| 1779 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco11128DcmP |
| 1780 | V | V.SsoSE61DcmP (100% identity) | V.Eco11128DcmP | |
| 1781 | DMT superfamily transporter inner | |||
| 2994 | replication protein for prophage | |||
| 2995 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco11128ORF2995P |
| 2996 | TraR/DksA family transcriptional regulator | |||
| 3971 | YjhS protein | |||
| 3972 | R | EcohubtORF19915P (100% identity) | Eco11128ORF3972P | |
| 3973 | endonuclease | |||
| 4006 | 5-nucleotidase | |||
| 4007 | R | EcohubtORF20080P (100% identity) | GAAC | Eco11128ORF4007P |
| 4008 | integrase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3972 | restriction endonuclease | |||
| 3973 | R | SflN101McrBP (100% identity) | Eco11128McrBP | |
| 3974 | R | EcohubtMcrCP (100% identity) | Eco11128McrCP | |
| 3975 | Uncharacterised protein | |||