Escherichia coli NCTC11119 |
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Putative Escherichia coli NCTC11119 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,234,664 bp
GenBank #: UGBM00000000 (NZ_UGBM00000000)
REBASE acronym: Eco11119
Org_num: 43703
All begin NCTC11119_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4434 | methylated adenine and cytosine restriction | |||
| 4435 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco11119IP |
| 4436 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco11119I |
| 4437 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco11119I |
| 4439 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 530 | DamX protein | |||
| 531 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11119DamP |
| 532 | ribulose-phosphate 3-epimerase | |||
| 657 | membrane protein | |||
| 658 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco11119ORF658P |
| 659 | DNA-binding protein Fis | |||
| 1427 | TraR/DksA family transcriptional regulator | |||
| 1428 | M | M.SenG094ORF11761P (99% identity) | GATC | M.Eco11119ORF1428P |
| 1429 | replication protein for prophage | |||
| 2186 | phosphohydrolase | |||
| 2187 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco11119DcmP |
| 2188 | V | V.SsoSE61DcmP (100% identity) | V.Eco11119DcmP | |
| 2189 | DMT superfamily transporter inner | |||
| 2656 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco11119ORF2657P | |
| 2658 | membrane protein | |||
| 3280 | prophage protein | |||
| ??? | M | M.Eco3506ORFBP (100% identity) | GCCGGC | M.Eco11119ORFAP |
| 3282 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco11119ORFAP |
| 3283 | prophage protein | |||
| 3290 | IS2 element protein | |||
| 3291 | M | M.EcoST130ORF9760P (74% identity) | M.Eco11119ORF3291P | |
| 3294 | TolA protein (fragment) of prophage | |||
| 3771 | LexA repressor | |||
| 3772 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco11119ORF3772P |
| 3773 | CPS-53 (KpLE1) prophage protein | |||
| 4390 | LexA repressor | |||
| 4391 | M | M.SphSfIIORF43P (100% identity) | GATC | M.Eco11119ORF4391P |
| 4392 | CPS-53 (KpLE1) prophage protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4433 | GTP-binding protein YjiA | |||
| 4434 | R | SenHNK130MrrP (100% identity) | Eco11119MrrP | |
| 4435 | type I restriction enzyme EcoKI subunit R | |||
| 4437 | EcoKI restriction-modification system protein | |||
| ??? | R | SenHNK130McrBP (100% identity) | Eco11119McrBP | |
| 4440 | R | SenHNK130McrCP (100% identity) | Eco11119McrCP | |