Escherichia coli NCTC11115 |
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Putative Escherichia coli NCTC11115 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,728,888 bp
GenBank #: UGBI00000000 (NZ_UGBI00000000)
REBASE acronym: Eco11115
Org_num: 43699
All begin NCTC11115_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4150 | Uncharacterized conserved protein | |||
| 4151 | M | M.EcoRG065ORF11505P (54% identity) | M1.Eco11115ORF4151P | |
| 4152 | M | M.EcoRG065ORF11505P (45% identity) | M2.Eco11115ORF4151P | |
| 4153 | S | S.Eco13C09ORF19375P (99% identity) | S.Eco11115ORF4151P | |
| ??? | R | EcoC9965ORF4471P (99% identity) | Eco11115ORF4151P | |
| 4156 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | PUA domain (predicted RNA-binding domain) | |||
| ??? | M | M.EcoC9965DndBP (95% identity) | M.Eco11115DndB2P | |
| 4 | Phage integrase, N-terminal | |||
| 1 | M | M.EcoKTE9DndC2P (54% identity) | M.Eco11115DndC2P | |
| 2 | DNA thiolation protein; phage protein | |||
| 431 | DamX protein | |||
| ??? | M | M.EcoSTEC507DamP (100% identity) | GATC | M.Eco11115Dam |
| 433 | phosphoglycolate phosphatase | |||
| 538 | membrane protein | |||
| 539 | M | M.EcoC9965ORF612P (100% identity) | ATGCAT | M.Eco11115ORF539P |
| 540 | DNA-binding protein Fis | |||
| 1970 | phosphohydrolase | |||
| 1971 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco11115DcmP |
| 1972 | V | V.SsoSE61DcmP (100% identity) | V.Eco11115DcmP | |
| 1973 | DMT superfamily transporter inner | |||
| 3776 | Predicted transcriptional regulator | |||
| ??? | R | EcoC9965DptFP (100% identity) | Eco11115DptFP | |
| 3779 | DNA phosphorothioation-dependent restriction | |||
| ??? | hypothetical protein | |||
| 3779 | R | SflFF24DptGP (100% identity) | Eco11115DptGP | |
| 3780 | Type IV secretory pathway, VirB4 components | |||
| 3779 | DNA phosphorothioation-dependent restriction | |||
| 3780 | R | EcoC9965DptHP (99% identity) | Eco11115DptHP | |
| 3781 | Uncharacterised protein | |||
| 3782 | Uncharacterised protein | |||
| 3783 | M | M.EcoC9965DndEP (100% identity) | M.Eco11115DndEP | |
| 3784 | ATPase involved in DNA thiolation | |||
| 3783 | DNA thiolation protein; phage protein | |||
| 3784 | M | M.EcoC9965DndDP (100% identity) | M.Eco11115DndDP | |
| 3785 | PUA domain (predicted RNA-binding domain) | |||
| 3784 | ATPase involved in DNA thiolation | |||
| 3785 | M | M.EcoC9965DndCP (100% identity) | M.Eco11115DndCP | |
| ??? | hypothetical protein | |||
| 3785 | PUA domain (predicted RNA-binding domain) | |||
| ??? | M | M.EcoC9965DndBP (99% identity) | M.Eco11115DndBP | |
| 3788 | DNA-binding prophage protein | |||