Escherichia coli NCTC11108 |
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Putative Escherichia coli NCTC11108 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,785,184 bp
GenBank #: UGAT00000000 (NZ_UGAT00000000)
REBASE acronym: Eco11108
Org_num: 43695
All begin NCTC11108_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3998 | restriction endonuclease | |||
| 3999 | M | M.SflSTLE3ORF19325P (100% identity) | M.Eco11108ORF3999P | |
| 4000 | S | S.SflSTLE3ORF19325P (53% identity) | S.Eco11108ORF3999P | |
| 4001 | IS1 transposase | |||
| 4002 | IS1 transposase | |||
| 4003 | R | SflSTLE3ORF19325P (74% identity) | Eco11108ORF3999P | |
| 4005 | protein YjiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 376 | DamX protein | |||
| 377 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11108DamP |
| 378 | ribulose-phosphate 3-epimerase | |||
| 504 | membrane protein | |||
| 505 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco11108ORF505P |
| 506 | DNA-binding protein Fis | |||
| 1775 | phosphohydrolase | |||
| 1776 | M | M.EcoP136DcmP (100% identity) | CCWGG | M.Eco11108DcmP |
| 1777 | V | V.SflFF64DcmP (100% identity) | V.Eco11108DcmP | |
| 1778 | DMT superfamily transporter inner | |||
| 2992 | replication protein for prophage | |||
| 2993 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.Eco11108ORF2993P |
| 2994 | TraR/DksA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3697 | IS5 transposase and trans-activator | |||
| 3698 | R | Ecos81ORF18685P (100% identity) | GTAATC | Eco11108IP |
| 3699 | M | M.Eco9966IV (100% identity) | GTAATC | M.Eco11108I |
| 3700 | Uncharacterised protein | |||