Escherichia coli NCTC10279 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC10279 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,559,796 bp
GenBank #: UASG00000000 (NZ_UASG00000000)
REBASE acronym: Eco10279
Org_num: 43663
All begin NCTC10279_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13 | hydrolase | |||
| 14 | R | EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | Eco10279IP |
| 15 | RNase III inhibitor | |||
| 16 | Uncharacterised protein | |||
| 17 | S | S.EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | S.Eco10279I |
| 18 | M | M.EcoEH031ORF313P (100% identity) | CCAYNNNNNGTNG | M.Eco10279I |
| 19 | ybl103 | |||
| 170 | hydrolase | |||
| 171 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco10279ORF175P |
| 172 | Uncharacterised protein | |||
| 173 | metal-binding protein | |||
| 174 | S | S.EcoSO173ORF28895P (99% identity) | GATGNNNNNNTAC | S.Eco10279ORF175P |
| ??? | M | M.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | M.Eco10279ORF175P |
| 177 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4465 | cytoplasmic protein | |||
| 4466 | M | M.Sen527ORF25750P (100% identity) | M.Eco10279ORF4466P | |
| 4467 | YfdA | |||
| 4126 | YfdA | |||
| 4127 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco10279ORF4127P |
| 4128 | cytoplasmic protein | |||
| 4284 | lipoprotein | |||
| 4285 | M | M.EcoTWORF1742P (100% identity) | M.Eco10279ORF4285P | |
| 4287 | YjhS | |||
| 3951 | DamX protein | |||
| 3952 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10279DamP |
| 3953 | ribulose-phosphate 3-epimerase | |||
| 238 | DMT superfamily transporter inner | |||
| 239 | V | V.SsoSE61DcmP (100% identity) | V.Eco10279DcmP | |
| 240 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco10279DcmP |
| 241 | phosphohydrolase | |||
| 1406 | Uncharacterised protein | |||
| ??? | M | M.Eco15821ORFGP (96% identity) | M.Eco10279ORFAP | |
| 2744 | NinF protein | |||
| 2745 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco10279ORF2745P |
| 2746 | recombination protein ninB from phage origin | |||
| 886 | phage replication protein | |||
| 887 | M | M.Eco820ORF7065P (100% identity) | TGGCCA | M.Eco10279II |
| 888 | Predicted ATP-binding protein involved in | |||
| 918 | DNA-binding transcriptional regulator prophage | |||
| 919 | M | M.EfeE4C07ORF14735P (98% identity) | M.Eco10279ORF919P | |
| 920 | cell division protein | |||
| ??? | RM | EcoE115ORF5155P (99% identity) | Eco10279ORF3098P | |
| 3100 | helicase domain-containing protein | |||
| 3106 | N-acetylneuraminate epimerase 2 | |||
| 3107 | R | EcoE115ORF5147P (100% identity) | Eco10279ORF3107P | |
| 3108 | Uncharacterised protein | |||
| 2048 | DNA-binding protein Fis | |||
| 2049 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco10279ORF2049P |
| 2050 | membrane protein | |||