Escherichia coli STEC313 |
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Putative Escherichia coli STEC313 RM systems
Ref: Yang,X. et al. Int. J. Med. Microbiol. 310 (1), 151377 (2020)
REBASE ref # 29793
| Sequence length: | GenBank #: | |
| Chromosome: | 5,099,527 bp | CP041433 |
| plasmid pSTEC313: | 80,039 bp | CP041434 |
REBASE acronym: EcoC313
Org_num: 38087
All begin FNE82_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1825 | cell division protein DamX | |||
| 1830 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC313DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2355 | DUF2556 domain-containing protein | |||
| 2360 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC313ORF2360P |
| 2365 | DNA-binding transcriptional regulator Fis | |||
| 6355 | Com family DNA-binding transcriptional | |||
| 6360 | M | M.EcoH22ORF6530P (98% identity) | M.EcoC313ORF6360P | |
| 6365 | ribosome-associated translation inhibitor RaiA | |||
| 9645 | phosphohydrolase | |||
| 9650 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoC313DcmP |
| 9655 | V | V.EcosPA11DcmP (100% identity) | V.EcoC313DcmP | |
| 9660 | drug/metabolite exporter YedA | |||
| 10240 | TrmB family transcriptional regulator | |||
| 10245 | M | M.EcoC367ORF10575P (100% identity) | M.EcoC313ORF10245P | |
| 10260 | 60 aa hypothetical protein | |||
| 11880 | DUF1804 family protein | |||
| 11885 | M | M.EcoC367ORF11615P (100% identity) | M.EcoC313ORF11885P | |
| 11890 | 546 aa hypothetical protein | |||
| 23405 | LexA family transcriptional regulator | |||
| 23410 | M | M.EcoEC0362ORF5955P (93% identity) | M.EcoC313ORF23410P | |
| 23415 | PerC family transcriptional regulator | |||
| plasmid pSTEC313 | ||||
| 25770 | 73 aa hypothetical protein | |||
| 25775 | M | M.Sen527ORF25750P (100% identity) | M.EcoC313ORF25775P | |
| 25780 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12765 | DEAD/DEAH box helicase | |||
| 12770 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoC313ORF12770P |
| 12775 | R | EcoC367ORF12500P (100% identity) | GAACC | EcoC313ORF12770P |
| 12780 | 100 aa hypothetical protein | |||